Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0892 ATGCTTCTATCACAATTATCACTTCAATTCATTATGGAGAGTTCACACACCAGAGCTGCTCAAAAGCTTGTGAAGGCTAGTTCACAGTCTGCAGTTCCATGGAGCTCAACTAATAGAGGAGTGGTGAGATACAACATTCCGGCTCAACAGGGCTTCAGAAGCCATTCATGGTCAAAAGATTATCTCAAAGATCAACTCGGTGACAAATCTAAGGTTTTTCAAAAGCCCCCATTGAAGGAAAACACCAAGCCAGTGGAATTCAAGCTCCACACCCAACAAAGAGCGGTCAAACGGGCAATGTTCAACTACTCGGTAGCAACCAAGCTATATTTCATGGAGCAACAGAAGAAACTAGAAGAAAGGTTGCAGAAGTTGATAGAGGAGGAGGAGGTTAGGATGCTGAGGAAGGAGATGATTCCTAGAGCCCAATTGATGCCTTTCTTTGATAGACCCTTCTATCCACAAAGATCAAATAGGCCTTTGACAGTTCCAAGAGAGCCATGTTTCCACAACTTAAGCAGCAAATGCTGGAGCTGCATCTCCTGCGGTGGACTCTATGATTTTCATCAGCAATGTCCGGCTATGAAGCCCATTAAATAG 600 0.44 MLLSQLSLQFIMESSHTRAAQKLVKASSQSAVPWSSTNRGVVRYNIPAQQGFRSHSWSKDYLKDQLGDKSKVFQKPPLKENTKPVEFKLHTQQRAVKRAMFNYSVATKLYFMEQQKKLEERLQKLIEEEEVRMLRKEMIPRAQLMPFFDRPFYPQRSNRPLTVPREPCFHNLSSKCWSCISCGGLYDFHQQCPAMKPIK* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0892 199 Coils Coil 112 132 - -
Vvi4g0892 199 PANTHER TARGETING PROTEIN FOR XKLP2 55 173 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Vvi4g0892 199 Pfam Targeting protein for Xklp2 (TPX2) domain 87 162 IPR027329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0892 Vvi-Chr4 13533108 13535191 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0892 - - vvi:100262160 372.859