Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0889 ATGACATGCTCGAAATTATTCCTTAATTGTGCACTAACCTCACTTCTTGATAGCGCATTGAGGATCGTTGCCCAGGCAGCTTTCAGTGTTGAGAAGGCCATCGCTCGAGGATTATGGACAGATACTACCCCTTCCCCTAACAGTAAGGGGAAGAAGCTGATTGGGCCATTTGGTAGATCTGGAGAGGTTGGCGCTATTAGCTATCAGCATCGGAGGACTGCACATCACTCGCTTTATAGACCTCCTACAGTCAGAGCTCATTTCCTTCATCCGCAGTATGAGTATCAGCTAGATTATGCTCAGGAGCCTTATATTGCTCAGACTAGCATGCAGCCGCGACCACCACATCCGAGAGCCGCTACTCACCCGCCACCTAGACCATATACACAGAGGCCCGCGAGACAGTTCACTCAATTGGGCATGACTTTGATTAGAGCTTTTGAGAAGCTCAGAGACGCTGGAGTGATTGTTCCTTTGGCGCCGAGGCCTTTGCCCCATCCTATTCCTCCTCATTTCCGCTTCCATGAGCATTGCTTATATCATCAGATGCAGGGGCATGATACTGAGCGTTGTTCAGCACTCCATCATGCGATACAGGATTTGATTGATTCATGGGTGGTTGACTTGGCTAGGCCAAGTGTGACCACCAATCCCCTGCCTACACATTCTACACATGCAGTTCCTCCTCCTCCTAGTCTTTAG 702 0.4943 MTCSKLFLNCALTSLLDSALRIVAQAAFSVEKAIARGLWTDTTPSPNSKGKKLIGPFGRSGEVGAISYQHRRTAHHSLYRPPTVRAHFLHPQYEYQLDYAQEPYIAQTSMQPRPPHPRAATHPPPRPYTQRPARQFTQLGMTLIRAFEKLRDAGVIVPLAPRPLPHPIPPHFRFHEHCLYHQMQGHDTERCSALHHAIQDLIDSWVVDLARPSVTTNPLPTHSTHAVPPPPSL* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0889 233 MobiDBLite consensus disorder prediction 116 130 - -
Vvi4g0889 233 PANTHER DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA 106 226 - -
Vvi4g0889 233 MobiDBLite consensus disorder prediction 108 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0889 Vvi-Chr4 13491476 13495416 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0889 - - vvi:104882380 375.555