Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0888 ATGCTTGTTCCGGAGTGCAAACGAACTATAACTCAGATCCTTAATGCATTGTTGTCTGAGAAAGGTACTGATGCCAGTGTGCTTCTATGCATACTTGATGTAGTAAAGGGCTGGATTGAAGATGTCTTCAACAAGCCTGGAATTTCAAGTGCCTCAAGTGGGTTTCTCACTTCAAAGGAAATAGTCTCCTTTCTTCAGAAGCTTTCACAAGTTGAAAAGCAGAACTTCTCTCCAAGTGCTCTAGAAGAGTGGGACCAGAAATATCTTCAGTTTCTTTATGGAATTTGTGCTGATTTGAATAAATATCCTCTGTCCCTACGGCAAGAAGTGTTTCAAAAGGTGGAAAGGCAATTTATGCTTGGTTTAAGGGCAAGGGATCCTGAAGTTAGGATGAAATCACTTTATCATGTATCTCTTGGGAAGACATTATTCACAAGGCTACTAATAGGTGAATATGGACGTACAGAAAGGCTTGAGGAAACAGAAATTGATTTCATTTTTTTACCATGA 510 0.3922 MLVPECKRTITQILNALLSEKGTDASVLLCILDVVKGWIEDVFNKPGISSASSGFLTSKEIVSFLQKLSQVEKQNFSPSALEEWDQKYLQFLYGICADLNKYPLSLRQEVFQKVERQFMLGLRARDPEVRMKSLYHVSLGKTLFTRLLIGEYGRTERLEETEIDFIFLP* 170
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0888 169 Pfam Tra1 HEAT repeat ring region 5 148 IPR046805 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g0888 Vvi-Chr4 13462780 13463289 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0888 K08874 - vvi:100255847 280.026