Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0881 ATGCAAAGAGCAAAAATCACTGTGATGAAAGCTGTTGGACTTGAGGTCCTCTCTAACAAGCTTACAAGTTATGCTTTTAATGCACAAGTAGAGTTTGAGGATACTGAGGGTGTATGGATTAGGGATTTGCTCCTGACTATTTTGTTCCGAGATGCAAATGTTGTTCTGGTCCCTGCAACCATGCGCATCATACCGTCACTTGCACTGAAGCCTGATGAAGTGATTGACAGATTCTTTGCTGCCCAGGCAATGGCAAGTCTTGTTTGTAATAGAAGCAGGGAAATAAATCTTACGATTATAAATGCAGATGCAGTTGCTCGGTTAATAACTCTAATTGGTTACGTAGAATCAGATATGCCAAACCTTGTTGCTTTATCTAAAGAGTTTTGTCTGGTTCGGAAACTTGTTCAAGTTGTTCTTCAAAATCTTGTTGAAATTGAAGACATAAGAGTTGGTTCCACTGCTCGCAAATTTATACCTTTATTAATGGATCTTTTGAGACCAATTCCAAACAGATCAAGTGCCCCTCCAATTGCTGCTCAACTATTGACTGGTATTACAGATGGAAGTGATACAAACAAACTGATCATGGCTGAAGCTGGAGCATTGGATGCTCTAACCAAGTACTTGTCTTTGAGCCCTCAAGACTTTTTTGAGGCCACAGTGTCTGAGCTGTTGAGAATACTTTTTAGTAATCTTGATCTTCCTCGTTAG 714 0.3992 MQRAKITVMKAVGLEVLSNKLTSYAFNAQVEFEDTEGVWIRDLLLTILFRDANVVLVPATMRIIPSLALKPDEVIDRFFAAQAMASLVCNRSREINLTIINADAVARLITLIGYVESDMPNLVALSKEFCLVRKLVQVVLQNLVEIEDIRVGSTARKFIPLLMDLLRPIPNRSSAPPIAAQLLTGITDGSDTNKLIMAEAGALDALTKYLSLSPQDFFEATVSELLRILFSNLDLPR* 238
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0881 237 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 2 235 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Vvi4g0881 237 Gene3D - 44 235 IPR011989 -
Vvi4g0881 237 SUPERFAMILY ARM repeat 50 229 IPR016024 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g0881 Vvi-Chr4 13139625 13140338 Dispersed/Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0881 - - vvi:100260874 352.443