Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0878 ATGGAAGCTGTTGGACTTGAGGTCCTCTCTGACAAGCTAACAAGTTATGCTTCTAATGCACAAGTAGAGTTTGAGGATACTGAGGGTGTATGGATTAGGGATTTGCTCCTGACTATTTTGTTCCGAGATGCAAATGTTGTTCTGGTCCCTGCAACCATGCGCATCATACCGTCACTTGCACTGAAGCCTGATGAAGTGATTGACAAATTCTTTGCTGCCCAGGCAATGACAAGTCTTGTTTGTAATAGAAGCAGGGAAATAAATCTTACGATTATAAATGCAGATGCAGTTGCTGGGTTAATAACTCTAATTGGTTACGTAGAATCAGATATGCCAAACCTTGTTGCTTTATCTAAAGAGTTTTGTCTGGTTCGGAAACTTGTTCAAGTTGTTCTTGAAAATCTTGTTGAAATTGAAGACATAAGAGTTGGTTCCACTGCTCGCAAATTTATACCTTTATTAATGGATCTTTTGAGACCAATTCCAGACAGATCAAGTGCCCCTCCAATTGTTGCTCAACTATTGACTGGTATTACAGATGGAAGTGATACAAACAAACTGATCATGGCTGAAGCTGGAGCATTGGATGCTCTAACCAAGTACTTCTCTTTAAGCCCTCAAGACTTTTCTGAGGCCACAGTGTCTGAGCTGTTGAGAATACTTTTTAGTAATCTTGATCTTCCCCGTTAG 690 0.4029 MEAVGLEVLSDKLTSYASNAQVEFEDTEGVWIRDLLLTILFRDANVVLVPATMRIIPSLALKPDEVIDKFFAAQAMTSLVCNRSREINLTIINADAVAGLITLIGYVESDMPNLVALSKEFCLVRKLVQVVLENLVEIEDIRVGSTARKFIPLLMDLLRPIPDRSSAPPIVAQLLTGITDGSDTNKLIMAEAGALDALTKYFSLSPQDFSEATVSELLRILFSNLDLPR* 230
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0878 229 Gene3D - 17 227 IPR011989 -
Vvi4g0878 229 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 227 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Vvi4g0878 229 SUPERFAMILY ARM repeat 44 221 IPR016024 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi4g0878 Vvi-Chr4 13120985 13121674 Dispersed/Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0878 - - vvi:100260874 351.673