Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0877 ATGGGTGTGGGAATAATTTCTGTTCTGGGTGATTCTGTCAATAATTTGAAAATCGGCACTCCCACTGCAGTTGCGACTTTTGGAAGTTATGCTGAATTTCTGATGGTTCCTTCCAAACACATCCTTCCTGTGGCAAGACCAGATCCAGAAATTGTTGCCACGCTAACCTTAGGACTCACAGCATCAATTACTTTAGAAAAGGTAGCACAAATGGAATCCGGAATGTCACTGCTGCTGTGGGAGGAACTGGACGATTTGCAGTCCAGCTTGCAAAATCAGCTGGAAATAGAGTCATTGCAACTTGTGAAGGTAAGGAACAAGTTATGCTCATGCAACGGGAAGAAATGGGTCGTTGGTTTTGATTGTGAAGGTGTTGACCTATGTCACCATGACACATAG 399 0.4386 MGVGIISVLGDSVNNLKIGTPTAVATFGSYAEFLMVPSKHILPVARPDPEIVATLTLGLTASITLEKVAQMESGMSLLLWEELDDLQSSLQNQLEIESLQLVKVRNKLCSCNGKKWVVGFDCEGVDLCHHDT* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0877 132 SUPERFAMILY GroES-like 2 77 IPR011032 -
Vvi4g0877 132 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 2 78 - -
Vvi4g0877 132 Gene3D - 53 79 - -
Vvi4g0877 132 Gene3D - 2 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0877 Vvi-Chr4 13097996 13098394 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0877 - - sind:105169555 120.938