Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0874 ATGAACCTGTATGAAAAATGTCATCAGAAGTCATTCTTCCCTGAAGATATGAACCAAAGGACATTCCGTCCAAAAAAGAGTGCACCCTCAGGGAGTAAGGGGGCACAACTTAGAAAGCACATTGATGCCACCTTAGGTAGTGGAAATCTGAGGGAAGCAGTTAGACTTCCTCCTGGTGAAGATGCAAATGAGTGGCTTGCTGTCAATACTGTTGATTTCTTCAACCAGGTGAATCTGCTCTATGGTACGCTCACTGAGTTCTGTACACCAGAGAACTGTCCTACAATGACTGCTGGCCCCAAGTATGAGTATAGGTGGGCTGATGGTGTACAAATCAAGAAGCCTATTGAAGTTTCTGCTCCAAAATATGTTGAATACTTGATGGATTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAACGTCTATTCCGGGTATATGCCCACATTTATCACTCTCACTTTCAGAAAATCGTAAGTCTTAAGGAGGAGGCTCACCTCAACACATGCTTCAAGCATTTTATACTATTTACCTGTGAATTTGTGCTGATTGACAGGAAGGAGCTAGCTCCACTTCAAGAGCTTATAGAATCCATTATCGTTCCATATTGA 675 0.4237 MNLYEKCHQKSFFPEDMNQRTFRPKKSAPSGSKGAQLRKHIDATLGSGNLREAVRLPPGEDANEWLAVNTVDFFNQVNLLYGTLTEFCTPENCPTMTAGPKYEYRWADGVQIKKPIEVSAPKYVEYLMDWIEAQLDDESIFPQKLGAPFPPNFREVVKTIFKRLFRVYAHIYHSHFQKIVSLKEEAHLNTCFKHFILFTCEFVLIDRKELAPLQELIESIIVPY* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0874 224 FunFam MOB kinase activator 1A 10 222 - -
Vvi4g0874 224 PANTHER MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB 18 221 IPR005301 -
Vvi4g0874 224 SMART Mob1_phocein_2 40 213 IPR005301 -
Vvi4g0874 224 SUPERFAMILY Mob1/phocein 24 220 IPR036703 -
Vvi4g0874 224 Gene3D MOB kinase activator 10 222 IPR036703 -
Vvi4g0874 224 Pfam Mob1/phocein family 43 213 IPR005301 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0874 Vvi-Chr4 12787397 12843294 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0874 K06685 - psom:113297569 424.861