Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0863 ATGGACAGGCTACCCAAGTCTGCTGCAAATTACACAGCCCTCACTCCTATAAATTTCTTGACGAGAGCAGCAGTGGCTTATGCCAGGAAAACATCTTTGATATACGAAAGCACCCGGTTCACTTGGCAGCAAACTTACGAGCGCTGCTGCCGCCTTGCCTCCTCTCTTCATCGTCTCAACGTTGCCAAAAACGATGTTGTATCAGTTCTGGCTCCAAATATTCCAGCCATGTACGAGATGCACTTTGCAGTGCCCATGTGCGGGGCTGTCCTCAACACCATTAACATCAGGCTAGATGCCCACAACATAGCCACCATTCTGGGCCACTCGGAAGCAAAGGTGTTCTTTGTTGATTACCAATACGTGCCCTTGGCACGCGAGGCTCTCCTGCTACTAATGGCTCAACACAAGGAGAAGCTTGTGGCGGAGTCATCCATCCCCTTGGTCATTGTCATCGATGACATTGACACGCCCACAGGCGTACGGCTGGGCGAATTGGAGTACGAGCAGCTTGTCGCCAATGGGAATCCGGGCTATGCTCCGGTGGAAGTTGAGGATGAGTGGGATCCCATTGCTCTCAATTATACATCTGGTACCACATCGGCTCCAAAAGGAGTAGTGTACAGCCACAGAGGTGCCTACCTCAGCACTCTTAGCCTTCTTCTGGGATGGGAGATGGGAGGCGAGCCTGTTTATATGTGGTCACTTCCCATGTTCCATTGTAATGGGTGGACCTTCACCTGGGGAGTGGCGGCACGAGGTGGGACTAGTGTCTGCATTCGCAATACCACCGCCTACGATATGTATCGCAACATCGCCTTACACAATGTCACACATATGTGCTGCGCTCCCATAGTCTTCAATATCCTCCTTGAGGCCAAAGAAAATGAGCGCCAGCGGCTGAAAACTCCGGTTCAGATACTCACTGGTGGAGCACCCCCACCAGCACCTCTGCTAGAGAAGATTGAAGCTCTGGGCTTCCACGTTGTCCACGCTTATGGCCTGACTGAGGCAACCGGTCCTGCCCTTGTCTGCGAATGGCAGGCGGAGTGGAACCGCCTTCCCCGCGACCATCAGGCCAAACTGAAGGCGCGTCAAGGGATCAGCATACTGACCCTCGCGGATGTGGATGTGAAAAACCCGGACACAATGGCAAGTGTGCCACGCGACGGCAAAAGCATGGGGGAAATTGTGCTGCGCGGTAGCAGTATCATGAAGGGATACTTCAAGGACCCGGAGGCCACATCTAAAGCCTTCAAGAATGGCTGGTTTTTCACCGGCGACGTCGGGGTCATTCATCCAGACGGATACTTGGAGATCAAGGACAGATCGAAGGATGTGATCATATCGGGCGGTGAAAACATTAGCAGCGTAGAAGTGGAAAGTATACTATACAGGCACCCAAGAGTGCTGGAAGCTGCAGTGGTGGCAATGCCCCATCCCAAATGGGGAGAGAGCCCATGCGCATTCATCACCATAAACAAGAATCAAACGGGCCAGAATGATGATGTGAGTGAAGATGACATCATCCAATATTGCAGGAAAAATCTCCCCCGTTACATGATTCCTAAGAAGGTGGAAATTATGGAGCAACTTCCCAAGACTGCAACCGGCAAGATTCAAAAATTCGAGTTGAGGACTCTAGCCAAGACCCTTGTAATTTCCGAGAAAACATCCAACAAGAAGTCTACTCCCGTCAATGTGGAACAACCCAAGTATCTTGCTCATCAGCCTCATGAGCAAATCCTTGCATTGTCTCGTCTGTGA 1767 0.5139 MDRLPKSAANYTALTPINFLTRAAVAYARKTSLIYESTRFTWQQTYERCCRLASSLHRLNVAKNDVVSVLAPNIPAMYEMHFAVPMCGAVLNTINIRLDAHNIATILGHSEAKVFFVDYQYVPLAREALLLLMAQHKEKLVAESSIPLVIVIDDIDTPTGVRLGELEYEQLVANGNPGYAPVEVEDEWDPIALNYTSGTTSAPKGVVYSHRGAYLSTLSLLLGWEMGGEPVYMWSLPMFHCNGWTFTWGVAARGGTSVCIRNTTAYDMYRNIALHNVTHMCCAPIVFNILLEAKENERQRLKTPVQILTGGAPPPAPLLEKIEALGFHVVHAYGLTEATGPALVCEWQAEWNRLPRDHQAKLKARQGISILTLADVDVKNPDTMASVPRDGKSMGEIVLRGSSIMKGYFKDPEATSKAFKNGWFFTGDVGVIHPDGYLEIKDRSKDVIISGGENISSVEVESILYRHPRVLEAAVVAMPHPKWGESPCAFITINKNQTGQNDDVSEDDIIQYCRKNLPRYMIPKKVEIMEQLPKTATGKIQKFELRTLAKTLVISEKTSNKKSTPVNVEQPKYLAHQPHEQILALSRL* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0863 588 Gene3D - 446 551 IPR045851 -
Vvi4g0863 588 PANTHER ACYL-ACTIVATING ENZYME 2 553 - -
Vvi4g0863 588 FunFam Long-chain-fatty-acid--CoA ligase FadD 1 445 - -
Vvi4g0863 588 Gene3D - 3 445 IPR042099 -
Vvi4g0863 588 SUPERFAMILY Acetyl-CoA synthetase-like 9 552 - -
Vvi4g0863 588 FunFam 2,3-dihydroxybenzoate-AMP ligase 445 553 - -
Vvi4g0863 588 Pfam AMP-binding enzyme 22 450 IPR000873 -
Vvi4g0863 588 Pfam AMP-binding enzyme C-terminal domain 459 539 IPR025110 -
Vvi4g0863 588 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Vvi4g0863 588 CDD ttLC_FACS_AEE21_like 11 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0863 Vvi-Chr4 11742257 11744149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0863 1 552 Miscellaneous Gene Families AT3G16910 50.717 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0863 K23618 - vvi:100253077 1184.86