Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0850 ATGATTCCCCCAAGTCTTGAATATGATCGTCGAGCCTTTTGCTTTTGTCTAGCTTGTCATCTGTATAAACCTCAATCGTCCAATTCCCTGGGAACTTCTATAGTAAATGGACTATACAGAATTGTGATTAATCAAATATTGCAAAGCCCCGGCATTTATTATCGGTCAGAATTGGACCATAACGGAATTTCGGTCTATACCGGCACCATAGTCTCAGATTGGGGAGGAAGATTAGAATTAGAGATTGATAGAAAAGCAAGGATATGGTCTCATGTGAGTAGGAAACAAAAAATATCTATTCTAGTTCTATCATCAGCTATGGGTTCGAATCTAAGAGAAATTCTAGAGAATGTTTGCTATCTTGAGATTTTTTTGTCTTTCCTGAATGATAAGGAGAAAAAAGAAATTGGGTTAAAAGAAAGTGCCATTTTGGAGTTTTATCAACAATTTGCTTGTGTAGGTGGGGATCTGGTATTTTCTGAATCATTATGTAAGTCTTCATATTATGTGATGAATGAAAATTTCAAGCGAGTTGTCAAGGTTGTTAACAAAGATTACCCTGAATTTACCCAATAG 576 0.3576 MIPPSLEYDRRAFCFCLACHLYKPQSSNSLGTSIVNGLYRIVINQILQSPGIYYRSELDHNGISVYTGTIVSDWGGRLELEIDRKARIWSHVSRKQKISILVLSSAMGSNLREILENVCYLEIFLSFLNDKEKKEIGLKESAILEFYQQFACVGGDLVFSESLCKSSYYVMNENFKRVVKVVNKDYPEFTQ* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0850 191 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 26 174 IPR015712 GO:0003899|GO:0006351|GO:0032549
Vvi4g0850 191 Gene3D RNA polymerase Rpb2, domain 2 47 169 IPR037034 GO:0003677|GO:0003899|GO:0006351
Vvi4g0850 191 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 31 150 - -
Vvi4g0850 191 Pfam RNA polymerase Rpb2, domain 2 48 166 IPR007642 GO:0003677|GO:0003899|GO:0006351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0850 K03043 - vvi:4025099 261.151