Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0849 ATGGGTAAGGCACGTGCAATTGGCGTTGGCATGGACAATTCAGCAAACAGCAAATCAGCCCTGAGATGGGCTGTTGATAATCTGATTGATGCTGAAGATTGCCTCATCTTAATCTACGTCCAGTCCCCCAAATCTGAGCATCCCAAGAAGCAGCTTTTTGAAGACACTGGATCTCCTTTAGTTCCTCTGGAGGAATTCAGAGATATTAACCTGTCAAAGCAGTATGGGTTAAACCCAGATCCAGAAGTTCTTGATATACTTGACACAGTTGCAAGGAGCAAAGGGGCTAAGGTGGTGGCAAAGGTCTACTGGGGAGATCCAAGGGAGAAGTTGTGCGATGCTGTGGATGACCTCAAGCTTGATTGTCTAGTTCTTGGGAGCAGAGGTTTAGGTGTTCTCAGAAGGATTCTGCTAGGGAGTGTAAGCAACTATGTGATGGTACATGCCTCATGTCCAGTTACAGTTGTGAAGGGGACGCCAGCTACCAAACCCTAG 495 0.4707 MGKARAIGVGMDNSANSKSALRWAVDNLIDAEDCLILIYVQSPKSEHPKKQLFEDTGSPLVPLEEFRDINLSKQYGLNPDPEVLDILDTVARSKGAKVVAKVYWGDPREKLCDAVDDLKLDCLVLGSRGLGVLRRILLGSVSNYVMVHASCPVTVVKGTPATKP* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0849 164 PANTHER IMP2'P 1 159 - -
Vvi4g0849 164 Pfam Universal stress protein family 5 157 IPR006016 -
Vvi4g0849 164 CDD USP_Like 7 156 - -
Vvi4g0849 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Vvi4g0849 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Vvi4g0849 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Vvi4g0849 164 Gene3D HUPs 3 164 IPR014729 -
Vvi4g0849 164 FunFam Universal stress protein family protein 1 160 - -
Vvi4g0849 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0849 Vvi-Chr4 11299409 11300338 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0849 - - vvi:100251331 313.923