Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0846 ATGGCTACTTCCCGTAGAGAAAGGTGGTCTTTTGATAGTGAATATTTGGGCTTCAATCATGATAAGATAACCATGTCTAGTAGCAGAATTTCAGCATCTCCTTTTATCGATCTACAAACATGTGGTGTTTGTGCAAAACTCTTGACTGAGAGATCTTCATGGGGCAGCCAGAAAATTATTGCTAGTAACGAGCTCTCAGTGGTGGCGGTTTCAATTTGTGGCCATGTTTACCATGTAGAGTGCTTGAAGATGGCAACTACAATCACTAGCCTTACAGAACAGACTCAATGGCACCTCGAGCCCATAGACACAATCCTCATTTGCATGGCTATCCTTCCTAGGCCCATTTTCAAAGCTCATGCCCTTCAAAACTGA 375 0.4293 MATSRRERWSFDSEYLGFNHDKITMSSSRISASPFIDLQTCGVCAKLLTERSSWGSQKIIASNELSVVAVSICGHVYHVECLKMATTITSLTEQTQWHLEPIDTILICMAILPRPIFKAHALQN* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0846 124 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 98 IPR013083 -
Vvi4g0846 124 PANTHER EXPRESSED PROTEIN 4 87 - -
Vvi4g0846 124 SUPERFAMILY RING/U-box 40 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0846 Vvi-Chr4 11211853 11212227 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0846 - - vvi:100250419 153.295