Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0842 ATGTCATCTTTGCCATTTGGCTCTTTCCATGCTATTCTTGGACAGAGAGCAAAAATCCCAAGCCCTAGTTCAAGATTCTTCCACCGTTCGGTGCTGTCCCCGTCGTTCCGTGCTGCAGCGGCCGTTCAACACCATCGCCGTTCAACTCCGCCACTGTCGTTCAAAGCTGCTACCACTTTCAAAAGCTTTCATCCTTACATGTTTACCAATAAGAGAAGGCAGGAAGAACGTACTGGAAGATATGGAACTCCAAGGGTGCAGTACCTTCAGGAATTGGTGAGTCAATTTCAGAATGCAACTAACGAAGAAACAAAAGAGAGGATTGCTGCTAATTTGGCAAACTTTGCCTATGATCCTTACAATTACAACTTCTTGCGCCAGCTCAATGTTTTGGAACTTTTCCTAGACTGCATAACAGAACCAAATGAAAAACTTGTTGAATTTGGGGTTGGAGGGATCTGCAACTCTTGTGCTGATCCAGAAAATGCTGCAGTTATCACTAATTGTGGTGGAATCCCTCTTATCATTCAATGCTTATCAAGCCCAGTTAGAAACACTGTGAATTATGGTATTGGGGCATTGTACTATATCTGTAATGAATCAAACAAAGAAGAGATTGTGAGGCCAGAAGTGGTGGATGTCATCAAGAAGTATGCTGCAGCTGGATCGGTGAGTGTAAACTTCAGTAATCTGGCCAAGGCCTTTTTAGATAAGCATGTCTCCCAAGTCTAG 732 0.4344 MSSLPFGSFHAILGQRAKIPSPSSRFFHRSVLSPSFRAAAAVQHHRRSTPPLSFKAATTFKSFHPYMFTNKRRQEERTGRYGTPRVQYLQELVSQFQNATNEETKERIAANLANFAYDPYNYNFLRQLNVLELFLDCITEPNEKLVEFGVGGICNSCADPENAAVITNCGGIPLIIQCLSSPVRNTVNYGIGALYYICNESNKEEIVRPEVVDVIKKYAAAGSVSVNFSNLAKAFLDKHVSQV* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0842 243 SMART arm_5 159 199 IPR000225 GO:0005515
Vvi4g0842 243 SMART arm_5 118 158 IPR000225 GO:0005515
Vvi4g0842 243 SUPERFAMILY ARM repeat 87 220 IPR016024 -
Vvi4g0842 243 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 7 67 242 IPR042462 -
Vvi4g0842 243 Gene3D - 72 234 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0842 K24825 - vvi:100266771 359.377