Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0831 ATGGCATCTACATTTGTGGGGAACTCCACTTCAATCCAGGAGATGTTCAGGAGGGTGAGCGAGCAGTTCACAGCCATGTTTAGGTGCAAGTCTTTCTTGCACAGGTATACTGGGGAAGGAATGGATGAGATGGAATTCATGGAAGTAGAGAGCAACATGAATGATTTGGTGTCAGAATACCAGCAATACCAGGATGCAACTGCTAATGACGAGGGTGAGTATGAGGAAGGCGCAGAAGAGAATTATGAGGCCTAA 255 0.4627 MASTFVGNSTSIQEMFRRVSEQFTAMFRCKSFLHRYTGEGMDEMEFMEVESNMNDLVSEYQQYQDATANDEGEYEEGAEENYEA* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0831 84 MobiDBLite consensus disorder prediction 69 84 - -
Vvi4g0831 84 SUPERFAMILY Tubulin C-terminal domain-like 1 67 IPR008280 -
Vvi4g0831 84 PANTHER TUBULIN 2 65 IPR000217 GO:0005874|GO:0007017
Vvi4g0831 84 MobiDBLite consensus disorder prediction 63 84 - -
Vvi4g0831 84 FunFam Tubulin beta chain 12 81 - -
Vvi4g0831 84 Gene3D Helix hairpin bin 12 81 IPR023123 -
Vvi4g0831 84 PRINTS Beta-tubulin signature 15 26 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Vvi4g0831 84 PRINTS Beta-tubulin signature 50 68 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Vvi4g0831 84 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0831 Vvi-Chr4 10781349 10781603 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0831 K07375 - aof:109848641 129.413