Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0820 ATGTCAAGCTCTCAACTCCCTCTTCCTCTTCCTGAGTATTTGCAAGAAGATGAAGTAACTCAGGAACACAGGGACTTACTGTCCTCCCTCCCCAGAGAGAAGGGTTGGGTTACATCTCATCTCTTTCAATACCAAGGCTTTTGGCATACATCCAGGCATTTGAAAGGGGTAGTGGCATGCCAACAACACTTCCAAGCTCACGATACTGACATCCTCCTTGTCACCACTCCCAAATCAGGCACCACGTGGTTGAAGGCAATGGCGTTTGCCTTATTGAAAAGGGTTAGATTTCCTGATACCCGACACCACCCATTGCTCACAAACAACCCTCATGAGCTCGTGCCCTTCTTAGAGATTAAGCTCTATGCTGAAAGCAAGGTTCCTGATCTCACCTCATTTACTGCTCCAAGGCTCTTTTCAACTCATTTACCATTCACATCTCTGCCAGAATCTGTGAATACCTCAGGTTGCAAGCTTGTGTATCTATGTAGGAACCCCAGGGACACCTTCGTGTCATTCTGGCAGTTCACTAATAAGTTGAGACTCGAGAATATGGGGACTAATCCGCTCGAGGAGGTTTTTGATAAGTTCTGTTGGGGAGTGAGTTTGTCTGGACCCTTTTGGGACCATGTGTTGGGTTATTGGAAGGAAAGTTTGGAAAAGCCTGAGAAGATACTTTTCTTGAAGTATGAGGAGATGAAAGCACAACCCCATGTTCAGTTAAGGAGACTGGCTGAGTTCTTGGGGTGCCCATTTTGCCCAGAGGAAGAGACCAGATGTGTGGTGGATGAGATATTACAGCTGTGCAGTTTTGAGAACTTGAGCAATTTGGAGGTGAATAAGAATGGGAAACTGTCATCAGGGGAGGAACACAGCGCATTCTTTAGACGAGGTGAAGTTGGAGATTGGGTGAACTATTTGACAGCTGAGATGCTTGATAGATTAGATCATATAACTGAAGAGAAGCTCCATGGTTCTGGTTTAAAATTTGAGCCTATACAAACCTGTCACTTGTGCTGCTCATATGTTACTGGCCATAAAACAAGGAGATACAGCGGAAGGCGCATCCTCATGTCAAGCTCTCAACCTCCCATCCCTGCTCCCCAGGATTTGCAAGAAGATGGGCTCACTCAAGAATGCAGGGACTTACTCTCCTCCCTCCCTACAGAAGAAGGATGGCTTTTTGATGTCTATCAATACCAAGGTTTTTGGTTTCCGTCAAGGCAGATACAAGCAGTGCTGGCCAGCCAACAGCGTTTCCAAGCTCAGGACACCGACATCCTCCTTGTCACCACTCCCAAATCAGGCACCACCTGGCTGAAAGCAATAGTGTTCGCGTTCGTGAATCGGGTCAAGTTTCCGGACATGCAAGACCACCACCCCTTGCTCACAAGCAACCCTCATGAACTCGTGCCCTTACTTTGA 1425 0.4702 MSSSQLPLPLPEYLQEDEVTQEHRDLLSSLPREKGWVTSHLFQYQGFWHTSRHLKGVVACQQHFQAHDTDILLVTTPKSGTTWLKAMAFALLKRVRFPDTRHHPLLTNNPHELVPFLEIKLYAESKVPDLTSFTAPRLFSTHLPFTSLPESVNTSGCKLVYLCRNPRDTFVSFWQFTNKLRLENMGTNPLEEVFDKFCWGVSLSGPFWDHVLGYWKESLEKPEKILFLKYEEMKAQPHVQLRRLAEFLGCPFCPEEETRCVVDEILQLCSFENLSNLEVNKNGKLSSGEEHSAFFRRGEVGDWVNYLTAEMLDRLDHITEEKLHGSGLKFEPIQTCHLCCSYVTGHKTRRYSGRRILMSSSQPPIPAPQDLQEDGLTQECRDLLSSLPTEEGWLFDVYQYQGFWFPSRQIQAVLASQQRFQAQDTDILLVTTPKSGTTWLKAIVFAFVNRVKFPDMQDHHPLLTSNPHELVPLL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0820 474 Pfam Sulfotransferase domain 424 474 IPR000863 GO:0008146
Vvi4g0820 474 Pfam Sulfotransferase domain 68 327 IPR000863 GO:0008146
Vvi4g0820 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 468 IPR027417 -
Vvi4g0820 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 330 IPR027417 -
Vvi4g0820 474 PANTHER SULFOTRANSFERASE SULT 397 474 - -
Vvi4g0820 474 FunFam Sulfotransferase 12 330 - -
Vvi4g0820 474 Gene3D - 8 331 IPR027417 -
Vvi4g0820 474 Gene3D - 365 474 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0820 Vvi-Chr4 10470253 10475343 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0820 - - vvi:100252999 682.174