Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0804 ATGAGTAAAGAAGGGTGGCTCTACACCGGAGACGTGGCGGTGATGCACCCAGATGGGTATATAGAAATCAAGGACCGATCCAAGGACGTGATCATCAGCGGAGGCGAGAACTTGAGCAGTGTGGAAGTTGAGTCGGTGCTCTACACTCACCCAGCCGTGAACGAGGCGGCAGTGGTGGCTCGGCCCGACGACTTCTGGGGCGAGACTCCATGCGCGTTCGTGAGCTTAAAGCCAGAGTCGCCGGACAAGCCGACGGCGAAGGAGATGATGGAGTACTGTAGGGCGAGAATGCCGCACTACATGGTACCGAAGACGGTCGTATTCAAGGAAGAGCTGCCCAAGACTTCAACGGGGAAGATTCAGAAGTTTAAGCTAAGAGACATTGCCAAGGCTATGGGGTGTTCGCCGGCAAGTCGGATGTAG 423 0.5579 MSKEGWLYTGDVAVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAVVARPDDFWGETPCAFVSLKPESPDKPTAKEMMEYCRARMPHYMVPKTVVFKEELPKTSTGKIQKFKLRDIAKAMGCSPASRM* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0804 140 Gene3D - 1 32 IPR042099 -
Vvi4g0804 140 FunFam 2,3-dihydroxybenzoate-AMP ligase 28 133 - -
Vvi4g0804 140 Pfam AMP-binding enzyme C-terminal domain 42 119 IPR025110 -
Vvi4g0804 140 PANTHER ACYL-ACTIVATING ENZYME 2 133 - -
Vvi4g0804 140 SUPERFAMILY Acetyl-CoA synthetase-like 4 131 - -
Vvi4g0804 140 Gene3D - 33 137 IPR045851 -
Vvi4g0804 140 Pfam AMP-binding enzyme 4 33 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0804 Vvi-Chr4 9767135 9767557 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0804 3 132 Miscellaneous Gene Families AT1G20560 67.692 8.36e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0804 - - vvi:100261495 289.656