Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0803 ATGGCCACCCACCACATTTTCAAACGCATTCTTCTTTATCCTCCCTCCACATCCGTCAGATTCAAAACCACCTCAGTCCAATATGTAGCCTCCAGAGCCAGAGATCCCACATTCGAGAAGCTCATGGACAACTACAAAAACCTACTCAAAGTCATCGCCATTCAAGACCTCATCCTTGCAAACCCTAAAAACCCCACTGTCTCCCTCCAATTCCTCTCCAATCTTTCCCAAAAACTCCACCTCAACCGCGGTGCCGCCTCCTTCCTCCGCAAATACCCCCATATTTTCCACGTTTTCTATGACCCATCCAAGTCCCTGCCCTTCTGCAAATTGACTGACGCCGCAGTCGAAATTTCCCGCCTAGAAGCGGCTGCAATACGCGGTTCGATGCCCATTGTGGTGGACCGGTTGGTTCGGCTGCTGTCCATGTCCACGGTGGCGAGATCGTTGCCGCTTCGAGCGATTTTCAAGGTTTGGAGGGAGCTTGGCCTTCCTGATGATTTCGAGGACTCGGTAATATTGCAAAACCCCCATCTTTTTAAGCTTTGTGATGGCAATGAACCGAATACTCATTTGTTGAAGCTTGTAAGTGTAATTCCTAGTGTTAATTTGAGGGCTGCAGTTGAGAATTGGAGGATTATGGAGTGTTGTAAGGAGGATTGTGGTTCTAGTGTTGATCCACTCGAACTTCGGTTTAGTTTCAAGCATGGGTTTCCTCCGGGAATGAGGTTGGGGAAGAACTTTAAGGCCAAGGTTAAGGAGTGGCAGAGGCTGCTGTATGTGGGGCCGTATGAGGAAATGGGGGAGAAGAAGAAGTCTAAGTCTGGAATCATGGGGTTGGAGAAACGGGCAGTTGCAATTGTTCATGAATTTTTGAGTTTGACGGTGGAGAAGACGGTGGAAGTGGAGAAGATTAGTCATTTTAGGAAATGGTTTGGGATTGATTTGAATATAAGGGATTTGTTTTTGGACCATCCTGGGATGTTTTATTTGTCAACCAAGGGAAAGAGGCATACGGTTTTTTTGAGAGAAGCTTATGAAAGGGGTTGTTTGATTGATCCAAATCCTGTGTATGATGCTAGGAGGAAGCTTCTTGATCTTGTTGTTTTGGGACGCCATGGTTTATTTTCCAGTGATTCAACACTCCAGGACATGGATGGTTGTGAGGAGGGTAAGTTGCAAGAGGAGGGCGGCAACGGTTGA 1203 0.4697 MATHHIFKRILLYPPSTSVRFKTTSVQYVASRARDPTFEKLMDNYKNLLKVIAIQDLILANPKNPTVSLQFLSNLSQKLHLNRGAASFLRKYPHIFHVFYDPSKSLPFCKLTDAAVEISRLEAAAIRGSMPIVVDRLVRLLSMSTVARSLPLRAIFKVWRELGLPDDFEDSVILQNPHLFKLCDGNEPNTHLLKLVSVIPSVNLRAAVENWRIMECCKEDCGSSVDPLELRFSFKHGFPPGMRLGKNFKAKVKEWQRLLYVGPYEEMGEKKKSKSGIMGLEKRAVAIVHEFLSLTVEKTVEVEKISHFRKWFGIDLNIRDLFLDHPGMFYLSTKGKRHTVFLREAYERGCLIDPNPVYDARRKLLDLVVLGRHGLFSSDSTLQDMDGCEEGKLQEEGGNG* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0803 400 Pfam Plant organelle RNA recognition domain 34 372 IPR021099 GO:0003723
Vvi4g0803 400 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 17 377 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0803 Vvi-Chr4 9696115 9697317 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0803 - - vvi:100261573 803.127