Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0797 ATGATTTCCCTAGATCCACAGTGGAATAAATCTTCTAACGTATCCTCCAATGTTCGGATAAGAGATTGCTCAAAGTATGGGACATTTATTAACAAGGATCTTGGCTCAAAGGAAAAACTTCATGAGTTCCCAAATAAGGAAACAACTCTAAAAGATGGGGACTTGGTTTCATTTGGCACTGGTAATGCAACCTACAGGTTTGGTTTTGTCCCGCTCATATTTTTTGTTTATCGCTCAGAGCCTTTCCAAATGAATCATTCTCTTCAAGATAAAATTTCATCAATAGGCGCTTCTGTTACTCGTGCATGGAGTTCAGAGTGCACACATGTGCTTGTTGATCAGTTCATGCTGGTGAAAGAAGATTTAGTTGATATTTTCTTGGCCAAGAAGCCTCTTGTCCTTAATGATTGGATTGAGTTTGTTGCAGAAAAGAATATTCGAAATGAAATTCCAAGCTGCAATGACTATGTTCCGACCTTGACATGCGGAGGCGTATCTGTCAAAGTTGGCGACTCTATATCTAGAGAAAACTGCTTGAAAGGATGCACTTTTTTGTTGGAACCTGCACACAAGTACAACTTTGGGGATAGGTTGCAGTCACTATTGGAAGCAAGTGGTGCCAAGGTTGATTCGATTGATGGATTGTCTTCAAGAAGCCAAGGCTTGGAGGGAGGAGAAAATAATCGGGTGGTGCATGTAATCCCTGCATGTTCAGCAGACAAGTTTGATTCCTTCCATAACCGCAGATCTGTATCAAGTGTGAAAGAGATGAATTTGATTAGTGCTGTTATATCTGGACATCTGGATCCTTCTACTATAATATCGCCACCTGTACTTGTCTCATCTTCATGCTCCACAGATGAGACTGTAGTAGCTGATTCTGATGCAGAAGTCGAAACAGCCACATCAAGTCATGCCAATTCTGCTGCCCACACTAAAGAAGTCTTTAAGTATGATAGCAAAGGGGAGATATCTGTAGTAGCTGATTCTGATGCAGAGGTTGAAACAGCCACATTAATTCATGCCAATGCTGCTGCCTGCACTACAGAAACCATTAAATATGATAGCAAAGGGGAGATATCTGTAGTGGCTGATTCTGATGCAGAGGTTGAAACAGCCACATCAATTCATACCAATGCTGCTGTGCGCACTGCAGAAGACATCAAATATGATAGCAAAGGGGAGATATCTATTGGTCAGGCTGCTAATGCATCAGAGACTGGCCACATGACACATTTTAGACAAAGGAATGATGGTGTAACAACAAGACGAGACAAAGTTGATGAATCTGAAAGTGGAAATCCAGATGTTTTATACAGTCAAGATTTAATTGTGAGAGATATTAACTTGCTGACATCATTTTCTTCAACAAAAAATAGAATTGTAAATTTCAAATGCTTCAGAAAGGCAAAGACTCAATCTGGGAATAGCTTCAACAATCTTATTCCATTTGCAAAGTACCCATACAAAGAATCTGACAATGGGAGTGATGAAGTAATGCAATCTGTGAAAGAAGAAAAAAAGCGGAAGCAAATGGAAGCAATTGCAGAAGATTTATTCAACAATGAGAAGGGGAGACGACGAGGAGTAGCTGGTTCTCTTGCTGGCCTTCTTACTCGTGGTCGATGA 1629 0.4039 MISLDPQWNKSSNVSSNVRIRDCSKYGTFINKDLGSKEKLHEFPNKETTLKDGDLVSFGTGNATYRFGFVPLIFFVYRSEPFQMNHSLQDKISSIGASVTRAWSSECTHVLVDQFMLVKEDLVDIFLAKKPLVLNDWIEFVAEKNIRNEIPSCNDYVPTLTCGGVSVKVGDSISRENCLKGCTFLLEPAHKYNFGDRLQSLLEASGAKVDSIDGLSSRSQGLEGGENNRVVHVIPACSADKFDSFHNRRSVSSVKEMNLISAVISGHLDPSTIISPPVLVSSSCSTDETVVADSDAEVETATSSHANSAAHTKEVFKYDSKGEISVVADSDAEVETATLIHANAAACTTETIKYDSKGEISVVADSDAEVETATSIHTNAAVRTAEDIKYDSKGEISIGQAANASETGHMTHFRQRNDGVTTRRDKVDESESGNPDVLYSQDLIVRDINLLTSFSSTKNRIVNFKCFRKAKTQSGNSFNNLIPFAKYPYKESDNGSDEVMQSVKEEKKRKQMEAIAEDLFNNEKGRRRGVAGSLAGLLTRGR* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0797 542 MobiDBLite consensus disorder prediction 403 434 - -
Vvi4g0797 542 MobiDBLite consensus disorder prediction 411 432 - -
Vvi4g0797 542 Pfam FHA domain 15 59 IPR000253 GO:0005515
Vvi4g0797 542 SUPERFAMILY BRCT domain 69 146 IPR036420 -
Vvi4g0797 542 CDD BRCT 72 139 - -
Vvi4g0797 542 SUPERFAMILY SMAD/FHA domain 16 73 IPR008984 GO:0005515
Vvi4g0797 542 PANTHER NIBRIN-RELATED 6 526 IPR040227 GO:0006302|GO:0007095|GO:0030870
Vvi4g0797 542 Gene3D - 7 76 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0797 K10867 - vvi:100853048 1066.99