Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0796 ATGGCAGATCCTCAGAGAATCCATCCTGCCCAAGACCCTGAGGCTCCGCATACACCTACTGCCCCATTGGTGCCCCGCGGGGCTTCAAAGTCGGACAGAAGCGATCCGACCGAGCAGTATCCGCCCTTTCAGCGGACCATCCCGGTGATGCACTCAAAGCCACCCAAGAAAAAAAGAAGCTGTCTCTGCAAGTGCTTTTGCTGGACAATATCTCTCCTGCTGCTCTTAATCGTTATTATTGCGATTGTTGTTGCAATCCTTTTCCTTGTGTTCAAGCCCAAGCTCCCCAAATACTCCATTGACGGCCTGAGAATAACGCAATTAAGCCTCGGCAGTGACGATAGTTTATCAGCTACGTTTGATGTGAACATCACTGCAAGAAACCCCAACACGAAAATCGGAATATACTATGAAGGAGGAAGCAGTATAACCGTGTTTTACACAGGCACACAACTATGTGAAGGATCGCTGCCGAAATTCTATCAGGGTCACCAGAACACCACCGTGCTGACCGTGGAACTAACGGGACAAACCCAGAACGCCACCGGGCTGTTGACGACGTTGCAGGAGCAACGAGAAACAGGAAGCATTCCATTAACTCTGAAGGTTAAGCAACCAGTGAGGATCAAACTTGGGAAGTTGAAGCTGATGAAGATGAAGTTCAGGGCGACGTGCAACCTTGTGGTGGATAACCTAGATGCTAATAATACGATAAGTATTAAAAGTAGCAGCTGTAAGTTCAGATTAAAGCTATAA 756 0.4788 MADPQRIHPAQDPEAPHTPTAPLVPRGASKSDRSDPTEQYPPFQRTIPVMHSKPPKKKRSCLCKCFCWTISLLLLLIVIIAIVVAILFLVFKPKLPKYSIDGLRITQLSLGSDDSLSATFDVNITARNPNTKIGIYYEGGSSITVFYTGTQLCEGSLPKFYQGHQNTTVLTVELTGQTQNATGLLTTLQEQRETGSIPLTLKVKQPVRIKLGKLKLMKMKFRATCNLVVDNLDANNTISIKSSSCKFRLKL* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0796 251 SUPERFAMILY LEA14-like 85 210 - -
Vvi4g0796 251 Gene3D - 86 233 - -
Vvi4g0796 251 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 18 236 - -
Vvi4g0796 251 Pfam Late embryogenesis abundant protein 123 225 IPR004864 -
Vvi4g0796 251 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0796 Vvi-Chr4 9458118 9458873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0796 56 251 EF-hand Containing Proteins AT5G21130 31.472 1.05e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0796 - - vvi:100244374 475.707