Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0790 ATGCCTAAGGAAGGAACTCCGTTTCCATTCCCTCAACCTTACAGTGAGGCTAATATAGTCCTAGGTGAATGGTGGAATTCAGATATTGAAACAATGGTTAATCAAGCTAATAAGTTGGGCTTGCCTCCCCCTACCTCAGATGCTCATACTATCAATGGAAAACCAGGGCCACTCTTCCCATGCTCTGAGAAGCATACATTTGCCATGGAGGTCGAGTCAGGTAACACTTATCTCCTAAGGATTGTCAATGCTGCACTCAATGACGAGCTCTTCTTCGCCATTGCTGGCCATAACATGACAGTTGTGGAGATTGATGCAGTCTACACCAAGCCCTTCACAACCCAAGCTCTCCTAATTGCACCAGGCCAGACCACAAACGTCCTAATTAAAGCCGATCGATCTCCAAGTAGATACTTCATGGCAGCCAGGCCTTTCATGGATGCACCAATCCCTGTGGACAACAAGACTGTCACTGCAATTTTACAATACAAAGGCATCCCAAACACCATTCTCCCAACACTACCCCAATTGCCTGCTCCTAATGACACTAACTTTGCTTTGAGCTATAATGGTAAGCTTAAGAGTTTGAACACTCTACAATTTCCTGCAAACGTCCCTCTTCAAGTTGATCGCCATCTTTTTTACACTATCAGTTTAGGACAAAACCCATGCCCTTCCTGCCAAAATGGAACACAGCTCACAGCTTCACTGAACAATATAACCTTTGTGGTGCCAAAAGTTGGGCTTTTGCAAGCTCATTATTCCAATATGAATGGAGTTTTTAGAACTGACTTCCCAGATCGCCCTTTTGCCCCATTCAATTACACAGGCGCACCACTTACTGCTGACCTCGGCACTTCCCTAGGAACAAGGCTCAGCAAGTTGGCTTTCAATTCAACCATTGAATTGGTATTACAAGACACTAATCTCCTCACGGTTGAGTCGCATCCCTTTCATCTTCATGGTACAACTTCTTTGTTGTGGGGACTGGGATTGGAAATTTTGATCCCAAGAAAGACCCAGCTAAATTTAACTTGA 1038 0.4451 MPKEGTPFPFPQPYSEANIVLGEWWNSDIETMVNQANKLGLPPPTSDAHTINGKPGPLFPCSEKHTFAMEVESGNTYLLRIVNAALNDELFFAIAGHNMTVVEIDAVYTKPFTTQALLIAPGQTTNVLIKADRSPSRYFMAARPFMDAPIPVDNKTVTAILQYKGIPNTILPTLPQLPAPNDTNFALSYNGKLKSLNTLQFPANVPLQVDRHLFYTISLGQNPCPSCQNGTQLTASLNNITFVVPKVGLLQAHYSNMNGVFRTDFPDRPFAPFNYTGAPLTADLGTSLGTRLSKLAFNSTIELVLQDTNLLTVESHPFHLHGTTSLLWGLGLEILIPRKTQLNLT* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0790 345 Gene3D - 15 198 IPR008972 -
Vvi4g0790 345 Gene3D - 221 335 IPR008972 -
Vvi4g0790 345 SUPERFAMILY Cupredoxins 10 190 IPR008972 -
Vvi4g0790 345 Pfam Multicopper oxidase 287 326 IPR011706 GO:0005507|GO:0016491
Vvi4g0790 345 PANTHER MULTI-COPPER OXIDASE 7 331 IPR045087 -
Vvi4g0790 345 FunFam Laccase 14 199 - -
Vvi4g0790 345 Pfam Multicopper oxidase 19 165 IPR001117 -
Vvi4g0790 345 CDD CuRO_2_LCC_plant 19 163 IPR034285 -
Vvi4g0790 345 SUPERFAMILY Cupredoxins 206 329 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0790 Vvi-Chr4 9388596 9389860 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0790 K05909 - vvi:100260259 623.239