Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi4g0789 | ATGGCAATACATTTTAGTTGGCACCAGGGATCACTTTTTCTGGTCTTTTGTTTTCTTGGGTTTCTTTCCTTCCCAGCTGATGCAGCATTAAAGAAGTATCAGTTTGATATTCAAGTCAAGAATGTGAGCAGGCTATGCCATGCAAAACCAATTGTTACAGTAAATGGGATGTTTCCAGGCCCTACCATTTATGTTAGAGAAGGAGACCAAGTTCTTGTCAATGTCACAAACTACGCGCAATATAATGCTTCCATTCATTGGCATGGCTTGAAACAATTTCGCAACGGTTGGGCTGATGGACCAGCTTATATAACACAGTGCCCCATCAAAACTGGGCACAGCTACACTTACAATTTTCAAGTCATGGGTCAGCGAGGAACCCTATGGGGCATGCACACATTTTATGGCTAA | 411 | 0.4234 | MAIHFSWHQGSLFLVFCFLGFLSFPADAALKKYQFDIQVKNVSRLCHAKPIVTVNGMFPGPTIYVREGDQVLVNVTNYAQYNASIHWHGLKQFRNGWADGPAYITQCPIKTGHSYTYNFQVMGQRGTLWGMHTFYG* | 137 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi4g0789 | 136 | CDD | CuRO_1_LCC_plant | 33 | 129 | IPR034288 | GO:0005507 | |
| Vvi4g0789 | 136 | SUPERFAMILY | Cupredoxins | 21 | 129 | IPR008972 | - | |
| Vvi4g0789 | 136 | Gene3D | - | 22 | 135 | IPR008972 | - | |
| Vvi4g0789 | 136 | PANTHER | MULTI-COPPER OXIDASE | 34 | 129 | IPR045087 | - | |
| Vvi4g0789 | 136 | Pfam | Multicopper oxidase | 37 | 129 | IPR011707 | GO:0005507 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi4g0789 | Vvi-Chr4 | 9387927 | 9388566 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi4g0789 | K05909 | - | vvi:100260259 | 254.218 |