Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0785 ATGAAAGCATTGAGTGGTTGTTTCAAAAGGATAAAAATTTCTGCATATTTGGGACACTTAGAAGCCCACCACGAGCCAAGAGGCTTCGTAGCAGTGACCGTGCTTCTTACTGAGACGCACCTTACCCAAAGGATCGTCAAGTTCACCGTGATGATTATGTTCTTTTGTCTGTTCCATTTCTCACTTGTTCTTAGATGCAATTTTCCTTCTTTCTTTCTTCTTGGGCCTTTCTTATTACTAGGAATCACTTATGTTCGGGTGCTTGTAGTGCTAAAAGATAAAACTTATGCTTTTATCATGTATTCACATTGTGTATGCTTGCCTCAGATTGGTGACATGAAGAGACTAATTTCTCTACAACTATTGAAAAATTGCAGTTTGCTACTGTCTTTTGGTTTAAATTATCACAATTCACAATCAATTATATTGTTAATTTCTAGGCAAGATTATCTATGCAATAAATGTAAGAGACTAGGGCATTTTTCTAGAGATTGCCCAAATGTGACTGTATGCAACAACTGTGGCCTTCCTGGCCACATAGTTACTGAGTGTAACTCAACAACCATTTGTTGGAACTGTAAAGAGTCTGGACATCTTGCAAGCCAATGTCCTAATGATCCAGTGTGCCATATGTGTGGCAAAATGGGTCACCTGGCTTGGGATTGCTCGTGCCTAGGTCTACCTGCTCATGATGCGAGACTCTGCAACAACTGCTACAAGCCAGACCAGGTCTACCTGCTCATGTTTAACCGTGTTGTGCACAGAGAGAGATAG 774 0.4057 MKALSGCFKRIKISAYLGHLEAHHEPRGFVAVTVLLTETHLTQRIVKFTVMIMFFCLFHFSLVLRCNFPSFFLLGPFLLLGITYVRVLVVLKDKTYAFIMYSHCVCLPQIGDMKRLISLQLLKNCSLLLSFGLNYHNSQSIILLISRQDYLCNKCKRLGHFSRDCPNVTVCNNCGLPGHIVTECNSTTICWNCKESGHLASQCPNDPVCHMCGKMGHLAWDCSCLGLPAHDARLCNNCYKPDQVYLLMFNRVVHRER* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0785 257 ProSiteProfiles Zinc finger CCHC-type profile. 190 205 IPR001878 GO:0003676|GO:0008270
Vvi4g0785 257 SMART c2hcfinal6 151 167 IPR001878 GO:0003676|GO:0008270
Vvi4g0785 257 SMART c2hcfinal6 170 186 IPR001878 GO:0003676|GO:0008270
Vvi4g0785 257 SMART c2hcfinal6 189 205 IPR001878 GO:0003676|GO:0008270
Vvi4g0785 257 SMART c2hcfinal6 208 224 IPR001878 GO:0003676|GO:0008270
Vvi4g0785 257 PANTHER - 6 245 - -
Vvi4g0785 257 Gene3D - 188 226 - -
Vvi4g0785 257 Gene3D - 144 187 - -
Vvi4g0785 257 ProSiteProfiles Zinc finger CCHC-type profile. 209 222 IPR001878 GO:0003676|GO:0008270
Vvi4g0785 257 SUPERFAMILY Retrovirus zinc finger-like domains 148 187 IPR036875 GO:0003676|GO:0008270
Vvi4g0785 257 Pfam Zinc knuckle 170 185 IPR001878 GO:0003676|GO:0008270
Vvi4g0785 257 Pfam Zinc knuckle 190 205 IPR001878 GO:0003676|GO:0008270
Vvi4g0785 257 Pfam Zinc knuckle 152 167 IPR001878 GO:0003676|GO:0008270
Vvi4g0785 257 ProSiteProfiles Zinc finger CCHC-type profile. 152 167 IPR001878 GO:0003676|GO:0008270
Vvi4g0785 257 SUPERFAMILY Retrovirus zinc finger-like domains 187 223 IPR036875 GO:0003676|GO:0008270
Vvi4g0785 257 ProSiteProfiles Zinc finger CCHC-type profile. 171 184 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0785 K09250 - vvi:100251241 209.149