Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0780 ATGAAGTGTGAAAATGAAGTAGATGGTCTTTTCGGGAATGATCAATGTCAGATAGAATCAAACCATCATTTGAATACTGCAGAGCTAGCATCATCTCCTCATCTAGAATGGGATGCTTTCATTGATGGCCTTGAAGATGAGATGATATTTGACTATGAAAATATGGAATCTGTGGCTTATGGATACATAGTCATTGTTCACCTTGGGTTGAGGAGTCATCTTGGGAGGATGGCTGGAGGTGCGGCAACTGCCGAGAATGGTGGTAGCCAATCTCACCTGTCAGGTTTTGGGTGGTGGTTAGCTATTCAATTTCAAATGAGTCTGACTACAAGCCAAACCTTACTTCCTATGATTATGATGCACCAATTAGAGAATCTGGTGATGTGGACATTGCGAAGTTCAAAGCATTGCGAGGGCTTGCGAATCGACACAGTGCAACATCTTTTCGTTCAGTTCCTTCCAACACTAAAAAGAGAGGATATGGACCTATCCAGTTACAGAAAAACTGGATCTTTGTTTGATTTAATTGATAAAATAGATCCTATTGGTGTGGTTGAATATGAAAATCCAACTTCAATGGAGTCTGTGGGACAGATGTTTGGATTTTTATTATATACATCAGGATATGCAGAAAAAGACCAAGGCAGCAATTTGTTCATACCAAATGTGCATGACAGAGCTCAGGTTTTTATTTCATGCCCTTTTGAAGATAATAGTGGAAGACCAACATATGTAGGTACAATTGAAAGATGGTCAAATCAGAACTTAAGCCTTCCTGATACTAAATGTGCTTCCAAAATCAACTTATTTGTTTTAGTTGAAAACATGGGACGTGTAAATTATGGGTCACACTTGTTTAACCAGAAGGGTATTTTGTCTCTTGTTTATCTGGATGGAAATGTTCTGAAGAGTTGGAAGATTGTTGCAATTTTTTTCCAAAACCTGAATGAGGAGGTTTCCATAGAATTAGCACTCTATGCTGGCCGCTTTGTATACAACAATCGAGAATCGAATCGATACATTGATATTGGATCTTATGTAGTCTCCCACATGCATAGGAAATCTAGTACGATAAGCAATATGTTTGAAAGGCATCAGGATCTTCACCCCATTCTGTAA 1119 0.3861 MKCENEVDGLFGNDQCQIESNHHLNTAELASSPHLEWDAFIDGLEDEMIFDYENMESVAYGYIVIVHLGLRSHLGRMAGGAATAENGGSQSHLSGFGWWLAIQFQMSLTTSQTLLPMIMMHQLENLVMWTLRSSKHCEGLRIDTVQHLFVQFLPTLKREDMDLSSYRKTGSLFDLIDKIDPIGVVEYENPTSMESVGQMFGFLLYTSGYAEKDQGSNLFIPNVHDRAQVFISCPFEDNSGRPTYVGTIERWSNQNLSLPDTKCASKINLFVLVENMGRVNYGSHLFNQKGILSLVYLDGNVLKSWKIVAIFFQNLNEEVSIELALYAGRFVYNNRESNRYIDIGSYVVSHMHRKSSTISNMFERHQDLHPIL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0780 372 Gene3D - 166 310 - -
Vvi4g0780 372 FunFam Beta-galactosidase 166 311 - -
Vvi4g0780 372 PANTHER BETA-GALACTOSIDASE RELATED 180 315 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0780 Vvi-Chr4 8964135 8966253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0780 169 336 Glycoside Hydrolase AT1G72990 50.521 5.29e-54 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0780 K12309 - vvi:100251499 294.664