Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0779 ATGGCTCATCAAGGTGGTTCTAGAAAGATCCCTGGTATTTGGTATGCTGAAGTTTATGAGATTCCTAAAAGAAGAAGACAAGTCATTTGGAGAGTTGTTGTTAAAATGAGTAAGAATGCGTCACAGCTTGCTCTTCAGGCCAGATACCTTGACCATCATATAAGATGGGGTGATCTTGTTCGTCTTGAGCAGAACATCCATGATGTTAAAGATCCAGAAACAGAAGCTTCTGCTTTTAGAAACACATTCATATGTGATAAGAAAATTGTTGAAAACAAGATCAGATATGGGGTTGCCTTTGGGAATCAAAAGCATCTTCCCTTCCGTGTCATGAAGAATATAATAGAATTTAAGGAAATCCAAGATGAAAATGACAAGTTACTGTTGCCTCGACCAGACCTCGACTGGAGGTCGATCGGGAAGGAGGATACCTCTACTGAGAAGGAAGAGTTATTGGAAGAGAGAGAGTGTTTTTAA 477 0.3962 MAHQGGSRKIPGIWYAEVYEIPKRRRQVIWRVVVKMSKNASQLALQARYLDHHIRWGDLVRLEQNIHDVKDPETEASAFRNTFICDKKIVENKIRYGVAFGNQKHLPFRVMKNIIEFKEIQDENDKLLLPRPDLDWRSIGKEDTSTEKEELLEERECF* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0779 158 PANTHER PHD FINGER FAMILY PROTEIN 3 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0779 Vvi-Chr4 8953017 8954476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0779 2 126 EF-hand Containing Proteins AT5G22760 61.600 1.02e-47 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0779 - - vvi:100243147 214.157