Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0773 ATGGCTCCAAGATTGGATTTTTCGGATTTGTGGGGAAAGGATACAAGGAAGGGCACGCCGGTGGTAGTGACAATGGAGAACCCCAACTACTCAGTTGTAGAAATCGATGGCCCAGACTCTGCATTCCGGCCGGTCGAAAAGAGCAGGGGCAAGAATGCCAAGCAGGTTACATGGGTCTTGCTTCTAAAGGCTCATCGTGCCGTGGGTTGTGTTGCTTGGCTTGCTACAGTTCTCTGGGCATTGCTGGGAACCATTAAGAAGAGGTTGATTTTTAGGCAAGGAGTAGCTATGGAGAGTGAGAAGACGGGGAAGGGAAAACTGCTGTTTAGAATCATCAAAGTCTTCTTAGTCACTTCCTTGGCAATTCTTTCTTTTGAGGTGGTTGCTTATTTGAAGGGGTGGCATTATTTCCGGAATCCTAATTTACACATTCCTCGGACCTCAGATTTCCAGGGCTTGCTCCACATGGTTTATGTTGCTTGGTTGACTCTTCGGGCTGATTACATTGCCCCCCTAATTCAAGCTCTCTCTAAATTCTGTGTTGCTCTCTTCCTAATCCAGTCTGCGGATCGAATGGTGCTCTGCTTAGGTTGTTTATGGATCAAATACAAGAAGATTAAACCAAGGATTGATGGGGATCCATTCAAATTGGAAGATGTTGAGGGATCTGGCTATGAGTACCCCATGGTTCTTGTTCAAATCCCAATGTGTAATGAGAGGGAGGTGTATGAGCAGTCCATCTCTGCTGTCTGCCAAATTGATTGGCCAAAAGATCGCTTGCTGATCCAAGTTCTTGATGACTCTGATGATGAGAGCATTCAGTGTCTAATTAAAGCAGAAGTCTATAACTGGAGTCAGCAGGGTATCAACATAGTCTATCGGCATCGTTTGGTTAGAACCGGTTACAAAGCCGGGAATCTGAAGTCTGCCATGAGCTGTGACTATGTGAAGAATTATGAGTTTGTTGCGATTTTTGATGCAGATTTCCAGCCAAACCCAGATTTCCTTAAGCAGACGGTTCCACACTTTCAGGGCAATCCAGACTTGGGGTTGGTTCAAGCTAGATGGGCTTTTGTTAACAAGGATGAGAACTTGTTGACTCGGCTTCAAAACATTAATTTGTGTTTCCATTTTGAAGTGGAACAGCAGGTTAATGGGGTATTCCTAAATTTTTTTGGCTTTAATGGAACTGCTGGTGTTTGGAGAATCAAGGCTTTGGAGGATTCTGGAGGTTGGCTTGAAAGGACTACTGTAGAGGATATGGACATCGCTGTTCGAGCCCATCTGAATGGTTGGAAATTCATATTCCTCAATGATGTTAAGGTCCTCTGTGAAGTTCCTGAATCTTATGAAGCTTACAGGAAGCAGCAACATCGATGGCATTCTGGGCCTATGCAACTTTTCCGATTGTGTCTCCCAGCTGTCATAACTTCTAAGATATCAATATGGAAGAAAGCCAACATGCTACTACTGTTCTTCCTATTGAGAAAACTTATCCTTCCCTTCTATTCTTTTACATTGTTTTGCATAATTCTCCCTTTAACCATGTTTGTTCCTGAAGCAGAACTTCCTGTGTGGGTCATCTGTTATGTGCCTGTTTTTATGTCATTCCTCAACATTCTCCCTGCCCCAAAATCCTTCCCTTTCATTGTTCCCTACCTCCTCTTTGAAAACACCATGTCAGTGACCAAATTCAATGCGATGGTCTCTGGACTGTTCCAGTTGGGTAGCTCATATGAGTGGATTGTCACTAAGAAGGCCGGCCGAGCATCAGAATCTGACTTATTAGCTGCTGCAGAGAGGGACTCAAAGACAGTGAACCAACCCCTGATTCACAGAGGAGCTTCTGAGAGTGAACTCTCTGAGCTGAACCGTTTGAAGGAGCAGAAAGAATCAACTCCTCCAGCCGTTAAAAAAATCAACAAGATATATAGGAAAGAGCTCACACTGGCCTTCCTCCTACTCACTGCCTCTGTGAGGAGCCTATTAGCATCCCAGGGAGTCCATTTCTACTTCCTGCTCTTTCAAGGGGTGACCTTTCTTCTTGTGGGTCTTGACTTAATTGGAGAGCAGATGAGTCAGTGA 2085 0.4456 MAPRLDFSDLWGKDTRKGTPVVVTMENPNYSVVEIDGPDSAFRPVEKSRGKNAKQVTWVLLLKAHRAVGCVAWLATVLWALLGTIKKRLIFRQGVAMESEKTGKGKLLFRIIKVFLVTSLAILSFEVVAYLKGWHYFRNPNLHIPRTSDFQGLLHMVYVAWLTLRADYIAPLIQALSKFCVALFLIQSADRMVLCLGCLWIKYKKIKPRIDGDPFKLEDVEGSGYEYPMVLVQIPMCNEREVYEQSISAVCQIDWPKDRLLIQVLDDSDDESIQCLIKAEVYNWSQQGINIVYRHRLVRTGYKAGNLKSAMSCDYVKNYEFVAIFDADFQPNPDFLKQTVPHFQGNPDLGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAVITSKISIWKKANMLLLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRASESDLLAAAERDSKTVNQPLIHRGASESELSELNRLKEQKESTPPAVKKINKIYRKELTLAFLLLTASVRSLLASQGVHFYFLLFQGVTFLLVGLDLIGEQMSQ* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0773 694 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 447 IPR029044 -
Vvi4g0773 694 Pfam Glycosyl transferase family group 2 322 518 IPR001173 -
Vvi4g0773 694 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 530 IPR029044 -
Vvi4g0773 694 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 156 690 - -
Vvi4g0773 694 FunFam probable xyloglucan glycosyltransferase 5 221 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0773 Vvi-Chr4 8878852 8881902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0773 1 693 Miscellaneous Gene Families AT4G31590 82.014 0.0 1154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0773 - - vvi:100245256 1375.92