Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0758 ATGGAGGCTCACTCCCTCCTCAAGAAGCAAGGATTCAACGTGTCATCCTATGGGACGGGGGTGCACGTCAAGCTCCCTAAACCTTCCCTCAGAGAACCAAACATCTACGAGTTCGGAACCCTCTATAAGCACATGTTCAATGATCTCAGCTACAAAGATCCTGACCTACTACCTAATGTGGACCATGTTAAAGGCTATGGACAATGTAAATTTGCCTTGTCCTCTATTTGA 231 0.4632 MEAHSLLKKQGFNVSSYGTGVHVKLPKPSLREPNIYEFGTLYKHMFNDLSYKDPDLLPNVDHVKGYGQCKFALSSI* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0758 76 Pfam Ssu72-like protein 1 56 IPR006811 GO:0004721|GO:0005634|GO:0006397
Vvi4g0758 76 Gene3D - 21 60 - -
Vvi4g0758 76 PANTHER RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE 1 56 IPR006811 GO:0004721|GO:0005634|GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0758 Vvi-Chr4 8516604 8517115 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0758 K15544 - vvi:100256509 103.99