Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0745 ATGTTTAAGGTTCATCTGGGAGACACTCCTCATAACTTGACTGAACGTGATTTTGAACACCTGGCTTATAGAACTGATGGATTCTCTGGTTCAGATATTTATGTTTGTGTCAATAATGTACTATTTGAACCTATTCTAAAAATTAAGGATGCTTCTTACTTTGTAAAAACTTCCAATAACATCTGGGTCCCTTGTGACCCTATTCAACGCGGAGCTGTTCAGGTTACTTTGCAGGAGATTGAAGTGCAAAGCCTTGCTTCAAAGGTCCTCCCTCCGCCCATCTCAAGGACTAATTTTGAAAAAGTACTAGCAAGACAGAGACCAACAGTTAATAAAGCAGATCTTGTTCTTTTTCTCTAG 360 0.3889 MFKVHLGDTPHNLTERDFEHLAYRTDGFSGSDIYVCVNNVLFEPILKIKDASYFVKTSNNIWVPCDPIQRGAVQVTLQEIEVQSLASKVLPPPISRTNFEKVLARQRPTVNKADLVLFL* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0745 119 FunFam vacuolar protein sorting-associated protein 4A 1 109 - -
Vvi4g0745 119 Pfam Vps4 C terminal oligomerisation domain 62 116 IPR015415 -
Vvi4g0745 119 Gene3D - 1 105 - -
Vvi4g0745 119 PANTHER AAA DOMAIN-CONTAINING 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0745 Vvi-Chr4 8399685 8400044 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0745 K12196 - vvi:100243069 209.534