Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0735 ATGCCTGCTCCATTTGTACTACACACTGATTGTCCTCATTACTGGCGCTATCATCTTCCAGGTGAGTCAGAAGAGGAGTTCTCAACCAGATTAGCAAATAATTTAGAGAATCTTATCCTGAAAGAGGGACCAGAGACAATTGCCGCATTCATTGCAGAGCCTGTCATGGGAACAGGAGTTGCATCAAGAAGCCCTTTTCTGAAGTTGCCCTCCAGACGAGAGAATCCCTCTAAAAAGGCCCTATTTTCCTCTGCCACTCTCAATCCTAGCAGTTCTGATGGGTCCTTGTGGAAGAGAGCAGCTGAGTTGCATGTGGGAGTTGCTAGTCAGGGTGAAAATGCTAGCTATGAGATGCCTTGCCTCATTATTGCAGTGACAGATGATCTGGATCCTTATCCGCATGGCAATTCTCACTTGCATGCTGGGCCCACTCCTACGTACATCCAATTGCATGGCCGCCCTTGGCATGCCAATTTTAGTGGCCACGAGTCACTTCCCTTTATTTCTCTCTTCTTCACCATTCTTGGTTTTGGGAAATAA 540 0.4685 MPAPFVLHTDCPHYWRYHLPGESEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGTGVASRSPFLKLPSRRENPSKKALFSSATLNPSSSDGSLWKRAAELHVGVASQGENASYEMPCLIIAVTDDLDPYPHGNSHLHAGPTPTYIQLHGRPWHANFSGHESLPFISLFFTILGFGK* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0735 179 SUPERFAMILY PLP-dependent transferases 4 59 IPR015424 -
Vvi4g0735 179 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 2 59 - -
Vvi4g0735 179 Gene3D - 2 60 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0735 Vvi-Chr4 8216408 8217256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0735 91 133 EF-hand Containing Proteins AT5G27540 55.814 3.73e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0735 K16871 - ncol:116264598 125.946