Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0717 ATGGGTACGGCTGATTTGAAGGTAATATTTGGCAAGGGCCAGAAGCATGAACTGATTGTTTCTACACATCAGATGTGTGCTCTGATGCTTTTTAATAATGTTGATAACTTAAGTTATAAAGAAATAGAGCAAGCTATAGAGATCCCTGCCTCAGATTTAAAGAGATGTCTGCAGTCTATGGCTTGTGTTAAGGGAAAGAATATTCTCGGGAAGAAGCAGAACAGAGAGAGGGGGCCAAGATTCCTACTCCTTCATCCGTCCCTCTCTGTCTCTCTGTAA 279 0.4158 MGTADLKVIFGKGQKHELIVSTHQMCALMLFNNVDNLSYKEIEQAIEIPASDLKRCLQSMACVKGKNILGKKQNRERGPRFLLLHPSLSVSL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0717 92 PANTHER CULLIN 1 74 IPR045093 -
Vvi4g0717 92 Pfam Cullin family 1 75 IPR001373 GO:0006511|GO:0031625
Vvi4g0717 92 ProSiteProfiles Cullin family profile. 1 61 IPR016158 -
Vvi4g0717 92 Gene3D Cullin; Chain C, Domain 2 1 83 - -
Vvi4g0717 92 SUPERFAMILY Cullin homology domain 1 70 IPR036317 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0717 Vvi-Chr4 7943966 7944244 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0717 K03869 - vvi:100254227 129.028