Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0716 ATGGGTTTTGAGGCATTTTCAAGGTTTAAGAGAGAGATGATTACTCAGAAGAAGATGAATCTTCAGATAGAGGCGTTGAAGCACCAGATTGTGGTGGATCCGAAATACGCAGAGAAGACTTGGAATATTCTGGAACATGCAATCCATGAGATATGCAATCATAACGACAGTGGGCTTAGTTTCGAAGAACTATATAGAAATGCTTACAATATGGTGCTGCACAAATTTGGGGAGAAACTTTACTCTGGACTAATTTCAACTATGACTCATCATTTGGAAGTTATATCAAAATTGATTGAAGCTATTCAAGGAGAAATGTTTTTGGAAGAACTAAATGTGAAATGGGCAGACCATAACAAGGCATGA 366 0.3743 MGFEAFSRFKREMITQKKMNLQIEALKHQIVVDPKYAEKTWNILEHAIHEICNHNDSGLSFEELYRNAYNMVLHKFGEKLYSGLISTMTHHLEVISKLIEAIQGEMFLEELNVKWADHNKA* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0716 121 PANTHER CULLIN 35 120 IPR045093 -
Vvi4g0716 121 Gene3D Cullin Repeats 30 121 - -
Vvi4g0716 121 FunFam Cullin 3 27 121 - -
Vvi4g0716 121 SUPERFAMILY Cullin repeat-like 34 120 IPR016159 -
Vvi4g0716 121 Pfam Cullin family 41 120 IPR001373 GO:0006511|GO:0031625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0716 Vvi-Chr4 7943541 7943906 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0716 K03869 - vvi:100254227 194.126