Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0713 ATGGCAACTTACTTGAAGCTTCTCACAACCACTGTGTATGATAGAGTAGGTGGTGTTAGAGATCACATCATCAAGCTAAAGCACTACTTCAACAAGGCAAATGAGTTGAAAGTGGAGTTGAGTGAGAAATTCCTGAAATGGTTGATACTTGAGTCTCTTCCTACTTCCTTTGATGCAATGAAGTTGACCTATAATGCCTTGAAGGAAGAATGGACTTTGGAGAAGTTGATGTCCATTGTGGTGCAACATGAAGTCTCACTGAAGAAAAATGAGACTCACTTCATTGCTCTTGTTACTAACCAAGGGAGCAATATGAAGAAAAAACCTCCACACAAGAATTCTATTGAATGCAAACATGATTGA 363 0.3884 MATYLKLLTTTVYDRVGGVRDHIIKLKHYFNKANELKVELSEKFLKWLILESLPTSFDAMKLTYNALKEEWTLEKLMSIVVQHEVSLKKNETHFIALVTNQGSNMKKKPPHKNSIECKHD* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0713 120 Pfam gag-polypeptide of LTR copia-type 3 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0713 Vvi-Chr4 7866048 7866410 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0713 - - vvi:104881301 213.001