Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0707 ATGGGTATCCTGTTCACTCGAATGTTTTCTTCAGTCTTCGGCAACAGAGAAGCTCGAATTCTCGTTCTCGGCCTAGACAATGCTGGAAAAACCACTATTCTCTATCGGCTTCAAATGGGTGAGGTGGTCTCCACGATTCCAACAATTGGGTTTAATGTGGAAACAGTTCAGTATAACAACATCAAGTTTCAAGTCTGGGATCTGGGTGGACAGACAAGTATCAGGCCATACTGGAGATGTTATTTCCCAAATACTCAAGCAATAATTTATGTTGTTGACTCAAGTGACACTGATAGAATTGTAATAGCCAAGGATGAATTTCATGCAATTTTGGAGGAAGAAGAATTGAAAGGCGCCATTGTCCTCATCTTTGCAAACAAGCAGGATCTTCCTGGTGCACTTGATGATGCTGCTTTAACAGAAGCTTTGGAGTTGCACAAGATAAAAAACCGCCAATGGGCTATTTTTAAAACTTGCGCCATAAAGGGTGAAGGCCTCTACGAGGGCTTGGACTGGTTGAGTAATATTCTCAAGTCAGGTGGCTAA 546 0.4231 MGILFTRMFSSVFGNREARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRIVIAKDEFHAILEEEELKGAIVLIFANKQDLPGALDDAALTEALELHKIKNRQWAIFKTCAIKGEGLYEGLDWLSNILKSGG* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0707 181 CDD Arl1 19 175 - -
Vvi4g0707 181 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Vvi4g0707 181 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Vvi4g0707 181 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Vvi4g0707 181 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Vvi4g0707 181 FunFam ADP-ribosylation factor 1 6 181 - -
Vvi4g0707 181 PANTHER ADP RIBOSYLATION FACTOR-RELATED 8 173 IPR024156 GO:0005525
Vvi4g0707 181 Gene3D - 5 180 IPR027417 -
Vvi4g0707 181 Pfam ADP-ribosylation factor family 5 175 IPR006689 GO:0003924|GO:0005525
Vvi4g0707 181 SMART sar_sub_1 1 177 IPR006689 GO:0003924|GO:0005525
Vvi4g0707 181 NCBIfam small GTP-binding protein domain 16 164 IPR005225 GO:0005525
Vvi4g0707 181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 178 IPR027417 -
Vvi4g0707 181 SMART arf_sub_2 1 181 - -
Vvi4g0707 181 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0707 Vvi-Chr4 7704892 7722816 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0707 K07942 - vvi:100241677 356.681