LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi4g0701	ATGAGGAATGCAGCTACGTCTCTCGCCCGTCACCGTCACCGTCACTGCCACGCCACTCTCCCTCGCCCTCACCACGCCTCAATTCTTCCCAGAGCTTTGCAGCATGACAGTAATGTCGGGACTTTTCTATGGACATTTTTGTCCTCCAGATGTCAGAGAAGTATTGGAATTGGAAGAAGAGAGGATAACTGCTTGCCGCCGTATCTCTTGGCCCGGAATGCGTTTTCTACTGGCTATACCAGTGTGCATGGCGAGAGGCCATCTGCAGAGTATGCGAAGTTGAGGAAAGCATCACTAGAAAGTGAATTTGGGAATATCCTTGGAACTTATAGTTCAAAAAGTGCTTCGATTTTCTTCCATTTTGGCCCATTTTTGGCTTTGTATAGAGCTGCAATAATCTCATTTCAGGTGTTGAAACTAAGCATTTGGCACTTCTGTCTCCGAGACATAAAAAAACGTTCCATTAAGTTTCGTGAAACTCTGATCCGCTTGGGGCCTTTCTATGTGAAGCTTGGACAGGCTTTGAGCACCAGACCAGATTTATTACCAGCTGTATATTGCCAAGAGCTTGCCAAGTTACAGGATCAAATACCCCCATTTTCAACTCGTGCTGCAGTTAAATCTATTGAATCCCAGTTAGGCATTCCTGTTTCAGAAATATTTGCTGACATCAGCCCTGAGCCTATTGCTGCAGCATCCTTAGGACAGGTGTATAAAGCTCACCTGCATTCTGGAGAGCTAGTAGCTGTTAAAGTGCAAAGACCTGGTGTGTCGATTTTATTAACTCTTGATGCCTTGTTATTCAATATGATTGGAGGCCAATTAAAGCGATTTGCCAAGGCCCGTCGGGATCTGTTAGTAGCTGTTAATGAGATGGTAAGACATATGTTTAAAGAAATTGATTACATCCTAGAGGGACAGAATGCTGAGCGCTTTGCTTCCCTATATGGTTCCTACCAATTTAGTGCTGTAAAGAGTCCAAAAGGTAGAACTGGTGATTCTTTTGAGTACAAGAAGGTGAAGCATATTAAGGTTCCAAAAATATATTGGAACTTTACCCGCAAGGCTGTGCTGACAATGGAGTGGATAGATGGAATTAAGCTTACTGATGAAGCTGGCATGGAGAAAGCATGTTTAAACCGAAAGGAACTAATTGACCAGGGATTATATTGCTCCTTAAGGCAATTACTTGAGGTAGGATTTTTCCATGCTGATCCTCATCCAGGAAACCTTGTCGCTACTGCTGATGGATCTCTGGCATATTTCGACTTTGGAATGATGGGGGATATTCCTCGCCATTATCGTGTAGGACTTATACAAGTGCTTGTGCACTTTGTTAATCGTGACTCTCTGGGTTTGGCAAATGACTTTCTTTCTTTGGGATTTATTCCTGAAGGGGTTGATATTCAATTGGTGTCAGAAGCATTGCAAGCATCCTTTGGTGATGGGACTAGACAATCCCAAGATTTCCAGGCTATAATGATCCAATTGTACGATATTATGTATGAATTGAACTTCTCTCTTCCACCGGATTATGCCCTGGTGATAAGAGCACTGGGATCGCTGGAAGGCACAGCAAAAGCTTTGGATCCTAGTTTCAAAGTAGTTGAGAGCGCATATCCATATGTCATTGGGAGGCTTTTGGCAGACCCAAATCCTGATATGAGGAAAATATTGAGGGAACTTCTCATCCGTAACAATGGCTCCATAAGGTGGAATCGGCTTGAGCGCCTGATAGCAGCAGTATCTGAACAAGCTTCTGAGTCTGCAGAGGAGCCCCCCGACACTAAAGGCAACTCTTCAAGTCCTTTGGAATGGAAATCATTTGACATGCGTGCTGTTGTTGCTGCCACTGAAGATCTTTTCCAGTTCATTCTATCTAGAAAGGGTTTGAGGGTACGTGTTTTTCTCATCCGAGACATAATTTCAGCAACCGATATTTTTCTGCAAGATGAAGTTGTCGCATGCATTTTTTATGAGAAGCTTGGAGCAAAAGCACCATCAGAATCGGAGGGAGATGCAGTGCTGACAAGGGTAATCAATGGCTTTCAATATCTCAAACAAGCAATAAACTTGGCACCAGAGGTGTGGACGGGCATGCTAATACGCATGTCATTAAAGCCTGAGGTTCATAGTTTTATGCTGGACATAATCTCAGCATTAGCCATCCATTTTCGCCATAAAATTCCCGAGACTTTTTGGGTTTGTATCTCTAAGCTCCTTCACAAGTTGGTGAGAAACAACAGCCCTGATGATTTATAA	2262	0.4337	MRNAATSLARHRHRHCHATLPRPHHASILPRALQHDSNVGTFLWTFLSSRCQRSIGIGRREDNCLPPYLLARNAFSTGYTSVHGERPSAEYAKLRKASLESEFGNILGTYSSKSASIFFHFGPFLALYRAAIISFQVLKLSIWHFCLRDIKKRSIKFRETLIRLGPFYVKLGQALSTRPDLLPAVYCQELAKLQDQIPPFSTRAAVKSIESQLGIPVSEIFADISPEPIAAASLGQVYKAHLHSGELVAVKVQRPGVSILLTLDALLFNMIGGQLKRFAKARRDLLVAVNEMVRHMFKEIDYILEGQNAERFASLYGSYQFSAVKSPKGRTGDSFEYKKVKHIKVPKIYWNFTRKAVLTMEWIDGIKLTDEAGMEKACLNRKELIDQGLYCSLRQLLEVGFFHADPHPGNLVATADGSLAYFDFGMMGDIPRHYRVGLIQVLVHFVNRDSLGLANDFLSLGFIPEGVDIQLVSEALQASFGDGTRQSQDFQAIMIQLYDIMYELNFSLPPDYALVIRALGSLEGTAKALDPSFKVVESAYPYVIGRLLADPNPDMRKILRELLIRNNGSIRWNRLERLIAAVSEQASESAEEPPDTKGNSSSPLEWKSFDMRAVVAATEDLFQFILSRKGLRVRVFLIRDIISATDIFLQDEVVACIFYEKLGAKAPSESEGDAVLTRVINGFQYLKQAINLAPEVWTGMLIRMSLKPEVHSFMLDIISALAIHFRHKIPETFWVCISKLLHKLVRNNSPDDL*	754

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi4g0701	753	PANTHER	CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED	90	728	-	-
	Vvi4g0701	753	ProSiteProfiles	Protein kinase domain profile.	223	570	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vvi4g0701	753	CDD	ABC1_ADCK3-like	192	457	-	-
	Vvi4g0701	753	Pfam	ABC1 atypical kinase-like domain	192	454	IPR004147	-
	Vvi4g0701	753	SUPERFAMILY	Protein kinase-like (PK-like)	194	437	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi4g0701	Vvi-Chr4	7599402	7641030	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi4g0701	K08869		-	vvi:100246692	1485.32