Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0697 ATGCACTCTTTAAATGAAGATGGCTTTTTTCTTGTCAATGTTGGTTTTGGCAAGCCCCAACAAAATTTAAATCTAATAATCGACACAGGCAGTGACACAACTTGGATACGGTGCAACTCATGTTCATTAGGGAATTGCCACAACAAGAAAATCCCTACTTTTAACCCTTCCTTATCATCCTCTTATTCTAATCGTTCCTGCATCCCCTCTACGAAGACGAACTATACCATGAACTATGAAGATAACTCCTATTCCAAAGGAGTTTTCGTATGTGATGAGGTTACATTGAAGCCCGATGTATTCCCCAAGTTTCAATTTGGTTGCGGAGATAGTGGTGGTGGAGATTTTGGCTCAGCATCTGGGGTACTAGGCCTTGCACAAGGGGAACAATATTCTTTGATATCTCAGACAGCTTCAAAGTTCAAAAAGAAATTTAGTTACTGTTTCCCACATAATGAAAACACCAGAGGGTCTTTGTTATTTGGGGAGAAAGCAATTTCTGCATCTCCCTCGCTGAAATTTACGCGGCTTTTGAATCCATCTAGTGGGTCAGTGTATTTTGTCGAACTGATTGGTATAAGTGTTGCCAAAAAGCGATTGAACGTCTCTAGCTCATTGTTTGCATCACCTGGAACTATAATAGATTCCGGAACTGTCATCACTCATCTTCCTACCGCAGCCTATGAAGCACTCCGCACTGCATTCCAACAGGAAATGTTGCACTGTCCCTCTGTTTCTCCGCCGCCACAGGAAAAACCATTGGACACTTGCTATAATCTTAAGGGATGTGGGGGGAGAAACATAAAGTTACCGGAAATAGTACTACATTTTGTGGGAGAAGTGGACGTAAGTTTGCATCCATCAGGAATTCTTTGGGCCAATGGGGACCTAACTCAAGCTTGCTTGGCTTTCGCAAGAAAATCCCATCCTTCTCATGTAACCATCATCGGAAATAGACAACAAGTGTCTCTAAAAGTTGTGTATGACATAGAAGGGGGAAGGTTAGGATTTGGTAACGATTGCAAGCATTGA 1032 0.4205 MHSLNEDGFFLVNVGFGKPQQNLNLIIDTGSDTTWIRCNSCSLGNCHNKKIPTFNPSLSSSYSNRSCIPSTKTNYTMNYEDNSYSKGVFVCDEVTLKPDVFPKFQFGCGDSGGGDFGSASGVLGLAQGEQYSLISQTASKFKKKFSYCFPHNENTRGSLLFGEKAISASPSLKFTRLLNPSSGSVYFVELIGISVAKKRLNVSSSLFASPGTIIDSGTVITHLPTAAYEALRTAFQQEMLHCPSVSPPPQEKPLDTCYNLKGCGGRNIKLPEIVLHFVGEVDVSLHPSGILWANGDLTQACLAFARKSHPSHVTIIGNRQQVSLKVVYDIEGGRLGFGNDCKH* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0697 343 Pfam Xylanase inhibitor C-terminal 186 338 IPR032799 -
Vvi4g0697 343 Pfam Xylanase inhibitor N-terminal 10 162 IPR032861 -
Vvi4g0697 343 FunFam Aspartyl protease AED1 165 342 - -
Vvi4g0697 343 FunFam - 77 163 - -
Vvi4g0697 343 Gene3D Acid Proteases 1 163 IPR021109 -
Vvi4g0697 343 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 25 36 IPR001969 GO:0004190|GO:0006508
Vvi4g0697 343 ProSiteProfiles Peptidase family A1 domain profile. 10 338 IPR033121 -
Vvi4g0697 343 PANTHER ASPARTYL PROTEASES 8 336 IPR001461 GO:0004190|GO:0006508
Vvi4g0697 343 SUPERFAMILY Acid proteases 6 339 IPR021109 -
Vvi4g0697 343 Gene3D Acid Proteases 164 343 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0697 Vvi-Chr4 7497269 7498300 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0697 8 341 Miscellaneous Gene Families AT1G77480 24.590 4.66e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0697 - - vvi:100265510 674.085