Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0689 ATGAATCCAGACAGCATAACTTGGACACAGTGCAAACCCTGTGTGCGCTGCTTAAAAGACTCTCATCGGCATTTTGACCCATCGGCATCGTTGACTTATTCACTTGGTTCTTGCATTCCAAGTACTGTTGGGAACACCTATAACATGACATATGGCGATAAATCTACCTCTGTAGGAAACTATGGATGCGATACCATGACATTGGAGCCTTCTGATGTGTTCCCTAAGTTTCAATTCGGTTGCGGCAGAAATAATGAGGGTGATTTTGGCAGCGGAGCTGATGGGATGCTGGGGCTTGGACAAGGGCAGCTTTCTACCGTATCTCAAACAGCTTCGAAGTTTAAAAAAGTTTTCAGTTACTGTCTCCCTGAGGAAGATTCCATTGGATCGCTGCTGTTCGGAGAGAAAGCCACTTCCCAATCCTCCTTAAAGTTCACATCGCTTGTAAATGGTCCTGGAACCTCAGGGTTAGAGGAGTCAGGGTACTATTTCGTCAAGCTCTTGGATATAAGTGTTGGTAACAAGCGACTTAATGTTCCCAGCTCCGTGTTTGCATCACCTGGAACTATAATAGACTCGGGAACTGTCATCACTTGCCTCCCTCAACGAGCCTATTCAGCACTCACAGCTGCATTCAAGAAAGCAATGGCGAAATATCCTCTTTCCAATGGGAGGCGGAAGAAAGGTGACATATTGGACACATGCTACAATTTAAGTGGAAGGAAAGATGTGTTACTACCGGAGATAGTGCTACATTTTGGGGAAGGAGCCGACGTACGTTTGAATGGAAAGAGAGTTATTTGGGGGAATGATGCATCTCGTCTTTGCTTGGCTTTTGCTGGGAACTCCAAATCAACCATGAACTCCGAATTAACCATTATTGGAAATAGACAACAAGTGTCTCTAACAGTTCTATATGACATACAAGGAGGAAGGATAGGGTTTGGGGGCAATGGTTGCTCCAAGTGA 969 0.4499 MNPDSITWTQCKPCVRCLKDSHRHFDPSASLTYSLGSCIPSTVGNTYNMTYGDKSTSVGNYGCDTMTLEPSDVFPKFQFGCGRNNEGDFGSGADGMLGLGQGQLSTVSQTASKFKKVFSYCLPEEDSIGSLLFGEKATSQSSLKFTSLVNGPGTSGLEESGYYFVKLLDISVGNKRLNVPSSVFASPGTIIDSGTVITCLPQRAYSALTAAFKKAMAKYPLSNGRRKKGDILDTCYNLSGRKDVLLPEIVLHFGEGADVRLNGKRVIWGNDASRLCLAFAGNSKSTMNSELTIIGNRQQVSLTVLYDIQGGRIGFGGNGCSK* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0689 322 FunFam Aspartyl protease AED1 136 321 - -
Vvi4g0689 322 Pfam Xylanase inhibitor N-terminal 6 134 IPR032861 -
Vvi4g0689 322 SUPERFAMILY Acid proteases 5 320 IPR021109 -
Vvi4g0689 322 Gene3D Acid Proteases 4 135 IPR021109 -
Vvi4g0689 322 Gene3D Acid Proteases 136 322 IPR021109 -
Vvi4g0689 322 ProSiteProfiles Peptidase family A1 domain profile. 1 316 IPR033121 -
Vvi4g0689 322 PANTHER ASPARTYL PROTEASES 6 314 IPR001461 GO:0004190|GO:0006508
Vvi4g0689 322 FunFam - 49 135 - -
Vvi4g0689 322 Pfam Xylanase inhibitor C-terminal 163 315 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0689 Vvi-Chr4 7362549 7364372 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0689 6 322 Miscellaneous Gene Families AT1G77480 24.571 1.06e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0689 - - vvi:100854540 635.95