Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0685 ATGACATATGGCGATGACTCTACCTCTGTGGGAAACTATGGATGCGATACCATGACATTGGAGCCTTCTGATGTGTTCCAAAAGTTTCAATTCGGTCGTGGAAGAAATAATAAGGGTGATTTTGGCAGTGGAGTTGATGGGATGCTGGGGCTTGGACAAGGGCAGCTTTCTACCGTATCTCAAACAGCTTCAAAATTTAACAAAGTTTTCAGTTACTGTCTCCCTGAGGAAGATTCCATTGGATCGCTGCTGTTCGGAGAGAAAGCCACTTCCCAATCCTCCTCCTTAAAGTTCACATCGCTTGTAAATGGTCCTGGAACCCTACAGGAGTCAGGGTACTATTTCGTCAATCTCTCGGATATAAGTGTTGGTAACGAGCGACTGAATATTCCCAGCTCGGTGTTTGCATCACCTGGAACTATAATAGACTCGAGAACTGTCATCACTCGCCTGCCTCAACGAGCCTATTCAGCACTCAAAGCTGCATTCAAGAAAGCAATGGCGAAATATCCTCTTTCCAATGGGAGGCGGAAGAAAGGTGACATATTGGACACATGCTACAATTTAAGTGGAAGGAAAGATGTGTTACTACCGGAGATAGTGCTACATTTTGGGGGAGGAGCCGACGTACGTTTGAATGGAACGAATATTGTTTGGGGGAGTGATGAATCTCGTCTTTGCTTGGCTTTTGCTGGGAACTCCAAATCAACCATGAACCCCGAATTAACCATTATTGGAAATAGACAACAATTGTCTCTAACAGTTCTATATGACATACAAGGAGGAAGGATAGGGTTTAGGAGCAATGGTTGCTCCCCGTGA 822 0.4477 MTYGDDSTSVGNYGCDTMTLEPSDVFQKFQFGRGRNNKGDFGSGVDGMLGLGQGQLSTVSQTASKFNKVFSYCLPEEDSIGSLLFGEKATSQSSSLKFTSLVNGPGTLQESGYYFVNLSDISVGNERLNIPSSVFASPGTIIDSRTVITRLPQRAYSALKAAFKKAMAKYPLSNGRRKKGDILDTCYNLSGRKDVLLPEIVLHFGGGADVRLNGTNIVWGSDESRLCLAFAGNSKSTMNPELTIIGNRQQLSLTVLYDIQGGRIGFRSNGCSP* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0685 273 FunFam Aspartyl protease AED1 89 272 - -
Vvi4g0685 273 Gene3D Acid Proteases 1 86 IPR021109 -
Vvi4g0685 273 FunFam - 1 87 - -
Vvi4g0685 273 Pfam Xylanase inhibitor C-terminal 114 267 IPR032799 -
Vvi4g0685 273 Pfam Xylanase inhibitor N-terminal 2 86 IPR032861 -
Vvi4g0685 273 SUPERFAMILY Acid proteases 2 271 IPR021109 -
Vvi4g0685 273 ProSiteProfiles Peptidase family A1 domain profile. 1 267 IPR033121 -
Vvi4g0685 273 PANTHER ASPARTYL PROTEASES 2 265 IPR001461 GO:0004190|GO:0006508
Vvi4g0685 273 Gene3D Acid Proteases 87 273 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0685 Vvi-Chr4 7263121 7263942 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0685 - - vvi:100243406 504.212