Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0684 ATGTTGGACACATGCTACAATTTAAGTGGAAGGAAAGATGTGTTACTACCGGAGATAGTGCTACATTTTGGGGATGGAGCCGACGTACGTTTGAATGGAAAGAGAGTTGTTTGGGGGAATGATGCATCTCGTCTTTGCTTGGCTTTTGCTGGGAACTCCAAATCAACCATGAACCCCGAATTAACCATTATTGGAAATAGACAACAAGTGTCTCTAACAGTTCTATATGACATACGAGGAAGAAGGATAGGGTTTGGGGGCAATGGTTGCTCCAAGTGA 279 0.4337 MLDTCYNLSGRKDVLLPEIVLHFGDGADVRLNGKRVVWGNDASRLCLAFAGNSKSTMNPELTIIGNRQQVSLTVLYDIRGRRIGFGGNGCSK* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0684 92 ProSiteProfiles Peptidase family A1 domain profile. 1 86 IPR033121 -
Vvi4g0684 92 SUPERFAMILY Acid proteases 2 90 IPR021109 -
Vvi4g0684 92 PANTHER ASPARTYL PROTEASES 2 84 IPR001461 GO:0004190|GO:0006508
Vvi4g0684 92 Gene3D Acid Proteases 1 92 IPR021109 -
Vvi4g0684 92 Pfam Xylanase inhibitor C-terminal 2 86 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0684 Vvi-Chr4 7260603 7260881 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0684 - - vvi:100252630 178.333