Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0675 ATGTTGATGCTCCAGAATCGGCCACCTCGGGGCGACTCCGATGATGCGCGGGAGTGGGGCGAGTTTCGCCATTTACCTGGAAAGCGGTTCTACGACTTCTCAAAGATTCGTCAGGAGATTCAGGATGAGACTGAAAGAGGAGCCGGATTTAACAAAGGGGTGTCGGAGAAGCAAATTCGCTTAATGATCTCCTCCCCAAATGTCCTTAATATGACCCTTATCGATTTACCTGGGATTACTAAGGTTCCTGTGGGTGACCAACCTACCGATATAGAAGCAAGGGTTAAGAAGATGATAATGTCCCATATCAAACAAGAAAACTGTATCATATTGGCAGTTACTCCTGCAAATTCTGATTTGGCAAACTCTGATGCTCTTCAAATGGCTAGAGATGCTGATCCAGCTGGTACTCGGACAATTGGTGTAATCACCAAGCTAGATATAATGGACAGGGGGACTAATGCGTGTAATTTTCTGCTTGGAAACATTGTTCCACTTAGCCTTGGTTACGTCGGTGTTGTGAATCGCAGTCAAGAGGACCTAAATCAAAACCGTAGCATTTCAGAAGCACTTGCTTATGAGGACCAGTTCTTCCATGATCATCCTGTGTATCATGGTCTGTCTGATTGTTGCGGCGTTCCCCAGTTAGCAAAGAAGTTAAATCAGATTCTGGAGCACCACATTAGAATGGTCCTACCAAGTTTGAAGGATGAACTAAATTGCCATATGATTGCTGTGGTAAAAGAGCTGCAGACATCTGGAGAAGTAGTGGAATCAAAAGTGGAACAAGGGGCAGTTCTGTTGAGCATCTTGAAAAAATACTGTGAAGCTTTCTCTGCCCTTGTTGATGGGAAAAGTCAGGAGATGTCAACTAGAGAGTTGTCTGGTGGAGCCAGAATCCACTACATTTTTCAGTCAATTTTTGTGAAGAGCTTGGAGGAGGTGGATCCTTGTGAAGCTCTAACAGACGAGGATATTCGAATGGCTATCCAAAATGCCAATGGTCCAAGAAATGCTTTATTTGTGCCAGAGGTCCCATTTCAAATTCTGGTTAGAAGACAAATACATCGTTTGTTAGACCCTAGCCTTCAGTGCCTACGATATGTCCATGCTGAACTTCTAAAGATGAGTCATGCTTGTGAGGCTCCTGAGGTGCAAAGATTCCCAGTATTGAGAAGGAAGCTGGAAGATGTCATGGGAAAGTTTTTGCGTGATGGCATAAAACCTGCTGAGAGAATGATAGGAAACATGATTGAGATGGAGAAGGGTTATATAAATTCTTCACATCCAAATTTCATAGGTGGAAGCAAAGCAGTAGAGCTTGCAGTCCAGCAGTTACGATCTTCTCAGGTATATAGCACAATTTATTCACAAACTGTTGCTTGCAATTTTACAGGTAATGCATACTCGAGAACTTGGGGAATTTCATCAATAATTGGGAAGTGGGCATCACCTAATGATCGTTCAGCTAACACAGCTCTTGGTGAAACATTTCATGATATGGAGCTGTTGCCCTCTATGATACAATTGAGAGACCCTCCACCCATCTTAAAGCCACTAGAAACACAAACAGAGCGTGAAGCAGTGGAAGTAATAGTAACCAAATTACTCCTGAGGTCTTATTATGACATTGTTAGAAAGAACGTTCAAGACTTCGTTCCTAAAGCTATAATGCATTTTCTGGTCAATCATACAAAAAGGGACCTGCTTAATGCCTTTGTACAAAAACTATACAGAGAGAACCTCTTCAAAGAGATGTTGCGGGAGCAGGATGATGTTATCCTAAAAAGAAAGCGGAGCCAAGAAATGTTCTGCGTTCTGCAGCAAGCTATTCAGGCAATTGATGAGGTTGATTCTGAAATGTCATCCCCAAATTCAAATTCAAGCTTCAGTGCTGATACAACCATGCGATTGCCAAGAACCCCGAGTCATCATTCCCATGTCTAG 1947 0.4278 MLMLQNRPPRGDSDDAREWGEFRHLPGKRFYDFSKIRQEIQDETERGAGFNKGVSEKQIRLMISSPNVLNMTLIDLPGITKVPVGDQPTDIEARVKKMIMSHIKQENCIILAVTPANSDLANSDALQMARDADPAGTRTIGVITKLDIMDRGTNACNFLLGNIVPLSLGYVGVVNRSQEDLNQNRSISEALAYEDQFFHDHPVYHGLSDCCGVPQLAKKLNQILEHHIRMVLPSLKDELNCHMIAVVKELQTSGEVVESKVEQGAVLLSILKKYCEAFSALVDGKSQEMSTRELSGGARIHYIFQSIFVKSLEEVDPCEALTDEDIRMAIQNANGPRNALFVPEVPFQILVRRQIHRLLDPSLQCLRYVHAELLKMSHACEAPEVQRFPVLRRKLEDVMGKFLRDGIKPAERMIGNMIEMEKGYINSSHPNFIGGSKAVELAVQQLRSSQVYSTIYSQTVACNFTGNAYSRTWGISSIIGKWASPNDRSANTALGETFHDMELLPSMIQLRDPPPILKPLETQTEREAVEVIVTKLLLRSYYDIVRKNVQDFVPKAIMHFLVNHTKRDLLNAFVQKLYRENLFKEMLREQDDVILKRKRSQEMFCVLQQAIQAIDEVDSEMSSPNSNSSFSADTTMRLPRTPSHHSHV* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0675 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 240 IPR027417 -
Vvi4g0675 648 MobiDBLite consensus disorder prediction 617 641 - -
Vvi4g0675 648 CDD DLP_1 4 233 IPR001401 GO:0003924|GO:0005525
Vvi4g0675 648 PANTHER DYNAMIN 6 617 IPR022812 -
Vvi4g0675 648 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 1 233 IPR030381 GO:0005525
Vvi4g0675 648 Pfam Dynamin GTPase effector domain 527 617 IPR003130 GO:0003924|GO:0005525
Vvi4g0675 648 PRINTS Dynamin signature 115 133 IPR022812 -
Vvi4g0675 648 PRINTS Dynamin signature 65 82 IPR022812 -
Vvi4g0675 648 PRINTS Dynamin signature 157 176 IPR022812 -
Vvi4g0675 648 PRINTS Dynamin signature 134 150 IPR022812 -
Vvi4g0675 648 ProSiteProfiles GED domain profile. 531 622 IPR020850 -
Vvi4g0675 648 SMART GED_2 526 617 IPR003130 GO:0003924|GO:0005525
Vvi4g0675 648 Gene3D - 2 241 IPR027417 -
Vvi4g0675 648 Gene3D Dynamin, middle domain 263 597 - -
Vvi4g0675 648 MobiDBLite consensus disorder prediction 617 648 - -
Vvi4g0675 648 Pfam Dynamin central region 154 439 IPR000375 -
Vvi4g0675 648 Pfam Dynamin family 15 145 IPR045063 -
Vvi4g0675 648 SMART dynamin_3 3 184 IPR001401 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0675 Vvi-Chr4 7027571 7101962 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0675 K17065 - csin:114295550 912.138