Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0669 ATGGATACAAGGCGCCTTCACTACACAGTCTCTTCGCCACCCACTCCACCACCCACCTCCACCACCTTCGTCCAAGCCGACGCCACCACCTTCCGAGACCTTGTCCAAAAGCTCACCGGCGCCGCCGTCGACTCTCCAGAGAAACTTCCCGTCACCCTCCCCGTCCGGGCATCTGCGCGACCCAACTCCGTCGACTCCTCCACCGGGCCTCGCCGCTCGCCGTTCAAGCTCCAGGAGCGGCGACACACCATGAGGAAGCTCGAGATCAAGCTGGGCATCACCACGCTCCGGAACTCGCCGTTTCCCCACTCCCCGCGCGTCGTGTCGCCGACTCCTAGCCCGGTGACTCCGCTTTCGTCGGAGTCGATGTTCTCCGGGAGAGCGGGGAGCTCCGGCGGAGAATCGCCGGCGTCGGAGGAGGAGAGGGCGATTGCAGAGAAGGGTTTTTACTTCCTCCCGTCACCGATGAGTACACCGAGGGGGTCGGAGCTGCCGGAGCTTTTGACTCTATTTCCTCTGAGTTCCCCGAGTCAACGCACTCGAGATTCGTGA 552 0.6322 MDTRRLHYTVSSPPTPPPTSTTFVQADATTFRDLVQKLTGAAVDSPEKLPVTLPVRASARPNSVDSSTGPRRSPFKLQERRHTMRKLEIKLGITTLRNSPFPHSPRVVSPTPSPVTPLSSESMFSGRAGSSGGESPASEEERAIAEKGFYFLPSPMSTPRGSELPELLTLFPLSSPSQRTRDS* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0669 183 MobiDBLite consensus disorder prediction 1 21 - -
Vvi4g0669 183 MobiDBLite consensus disorder prediction 113 132 - -
Vvi4g0669 183 Pfam VQ motif 19 41 IPR008889 -
Vvi4g0669 183 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 17 178 IPR039611 -
Vvi4g0669 183 MobiDBLite consensus disorder prediction 96 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0669 Vvi-Chr4 6981562 6982113 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0669 - - vvi:100242247 322.398