Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0666 ATGATGGGTTGGAAGTACAAAGCTGGGTTGGGCTTGATTGGAACTGTTGTTTTCATATGGGTCGCTTCTGCAGAGATTACTCAGAGAATCTTCTCAGAGTATAAACAGCCATTTGCGCTTACTTATCTTGGGGTGTCACTTATGGTGGTATATCTACCTATAGCGGTTCTTAAAGACTGGATCTGCAGCAGACTGGACATAAATTCATTTAAGAACCTTTGCAATGGCAGCACCATTGCCAAGTCTTCAGCTGGTTTAGCTATTCCTCTTAGAATAAATGAAATATGCCCTAGTTCAGAAACAGATACGGAAAGCAGTTTAAATACAGACATGGACCTTAGTGAAAATGAAGATGGTTGGTTGATCATCACAAACATGGAGGATGAGGTTGGCTTACTTGAAAAGAACCATGAACTCAGCTCATGGGAAATTGCCAAGTGTGGTTTTTATCTTGCTCCTATATGGTTTATTACAGAGTACTCGTCAAACTCTGCCCTGGCAAATACTAGTGTTGCAAGCACCACTGTCTTGACATCTACATCAGGGCTCTTTACACTTTTCTTTGGAGCTCTTCTTGGTCAGGACACCGTAAATATCACAAAGGTTGTTGCTGTTTTTATTAGCATGGCTGGTGTTGCCATGACCACGGTTGGAAAAACTTGGGCACCTGATGAAATGCTGAGCGCCTCTGAGAGTAGAAAGCACTCCATCATAGGAGACATTTTTGGTCTTCTGTCAGCTGTATCTTATGGCTTATTTACAGTGTTGCTCAAGAGATCTGCTGGATCAGAAGGAGACAAGGCTGATGTGCAAAAATTCTTTGGTTATATTGGTCTCTTCACTCTTCTTGGCTTTTGGTGGCTTGCTTGGCCACTTAACGCTGTGGGGATTGAACCCCAGTTCAAGTTGCCGCATTCAACATCCATTGGAGAAGTCGTGCTGTTAAATGGCTTCGTGGGCAGTGTTCTTTCAGATTATTTTTGGGCCCTTTCCGTGGTCTGGACTACCCCATTAGTTGCAACGCTGGGGATGTCGTTGACAATACCCCTGGCAATGATAGCTGACATGATGATCCATGGACGTGGGTACTCTGCTGTCTACATCTTTGGATGCATCGAGGTTTTTGCAGGATTTGTTATAGCCAACCTTTCAGATAAGTTTTCACCAAAGGCAGAAAGCTCGTATTCTAACTGA 1194 0.4338 MMGWKYKAGLGLIGTVVFIWVASAEITQRIFSEYKQPFALTYLGVSLMVVYLPIAVLKDWICSRLDINSFKNLCNGSTIAKSSAGLAIPLRINEICPSSETDTESSLNTDMDLSENEDGWLIITNMEDEVGLLEKNHELSSWEIAKCGFYLAPIWFITEYSSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDTVNITKVVAVFISMAGVAMTTVGKTWAPDEMLSASESRKHSIIGDIFGLLSAVSYGLFTVLLKRSAGSEGDKADVQKFFGYIGLFTLLGFWWLAWPLNAVGIEPQFKLPHSTSIGEVVLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMIADMMIHGRGYSAVYIFGCIEVFAGFVIANLSDKFSPKAESSYSN* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0666 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 219 - -
Vvi4g0666 397 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 4 392 - -
Vvi4g0666 397 Pfam EamA-like transporter family 153 216 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0666 Vvi-Chr4 6915834 6921007 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0666 K15289 - vvi:100247496 760.755