Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0662 ATGATAGTGGAGGAGGAGAATCCTCCAACACCCAGTGAGGTTGTGGAGGAAAATGAATCCAATGGAGGATTCTGTGATTTCATCTGTGCTCCAATCTATTGGTTCAAAATGCTTGCCATGGAACTGCATTGGAGTTTTGTATTTGGGGTTGTTGCAGTTTATGGGATAAGCCAAGGACTGGGTGGTGCTTTGGCTCGTGTCGGCACAGAGTATTATATGAAGGATGTTCAGAAGGTTCAACCTTCTGAAGCACAAATTTATGGAGGAATAACTTCTATTCCTTGGCTTGTCAAGCCTCTTTGGGGTCTTCTCACAGATGTGCTCCCAATCGTTGGGTATCACAGAAGGCCTTATTTCATTTTAGCCGGTCTTCTTGGTGTGATCTCTATGCTCGTGTTATCATTTCACAAAGACCTGCATCTTGTACTCGCATTGTTCTCTTTAACAGCAGGAAGTGCTGGGGTAGCAATAGCAGATGTCACCATTGATGCCTGCGTGGCTCAGAACAGTAATCTACACCCTTCTCTTGCAGCTGACATGCAAAGCCTGTGTGCACTAAGTTCATCAGTTGGTGCACTAGTGGGATTCTCTATTAGTGGTATTTTTGTCCACCTCATAGGCCCTACGGGGGTGTTTGGCTTGCTGACTATCCCGGCTACACTTGTACTTCTAGTTGGAATTGTTCTTAGTGAACCCCACACGCCTAACTTTGTTTACAGACAGGTAAACCAAAAGTTGCTTGACGCTTGCAAGGCAATGTGGACAACATTGAAATACCCAGATGTGTGGAGACCATGTTTGTATATGTACTTATCCCTCGCATTGAGCTTGAATATCCATGAAGGCTTGTTCTATTGGTATACAGACTCTAAGGAAGGTCCATTATTCTCTCAGGAGACTGTTGGCTACATATTCTCAATTGGCTCAGTTGGCTCCCTTTTAGGTGCCATACTCTACCAATATACTCTAAAGGACCACCCCTTCCGGGACTTGCTCTTCTGGACTCAGTTGCTTTATGGTTTATCAGGAATGCTGGATTTGATACTGGTGCTGCGTCTCAACTTGAAGTATGGCATACCAGATTATTTCTTCATTGTCGTTGCTGAAGGTGTATCTCAAATGATAGGACGGCTCAAATGGATGCCACTTCTTGTCCTCAGCTCCAAGCTTTGTCCCCCTGGCATTGAAGGCACATTCTTCGCCTTGCTTATGTCAATTGACAACCTTGGAATACTCTCATCCTCATGGGGAGGTGGCTTTCTACTCCATATCTTGAAGGTGACTCGGGTACAATTTGATAATCTGTGGATGGCGATTTTGATCCGAAACATACTGAGACTTAGCCCACTTGCTCTGCTGTTCTTGGTACCCCGTACTGATCCCAACTCTTCCATTATTCCCTCCCAAATCCTCCAGAATACCAAGCAGGCTGCCCATGCTTCACACCCTGAGAATGAGAATAAAAATGAGGATGGCAATATTGAATTGCTTCCTCTTGTTAACAATGTTGATAGTAGATGA 1521 0.4464 MIVEEENPPTPSEVVEENESNGGFCDFICAPIYWFKMLAMELHWSFVFGVVAVYGISQGLGGALARVGTEYYMKDVQKVQPSEAQIYGGITSIPWLVKPLWGLLTDVLPIVGYHRRPYFILAGLLGVISMLVLSFHKDLHLVLALFSLTAGSAGVAIADVTIDACVAQNSNLHPSLAADMQSLCALSSSVGALVGFSISGIFVHLIGPTGVFGLLTIPATLVLLVGIVLSEPHTPNFVYRQVNQKLLDACKAMWTTLKYPDVWRPCLYMYLSLALSLNIHEGLFYWYTDSKEGPLFSQETVGYIFSIGSVGSLLGAILYQYTLKDHPFRDLLFWTQLLYGLSGMLDLILVLRLNLKYGIPDYFFIVVAEGVSQMIGRLKWMPLLVLSSKLCPPGIEGTFFALLMSIDNLGILSSSWGGGFLLHILKVTRVQFDNLWMAILIRNILRLSPLALLFLVPRTDPNSSIIPSQILQNTKQAAHASHPENENKNEDGNIELLPLVNNVDSR* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0662 506 Pfam BT1 family 58 225 IPR039309 -
Vvi4g0662 506 Pfam BT1 family 266 460 IPR039309 -
Vvi4g0662 506 CDD MFS_FBT 49 454 - -
Vvi4g0662 506 Gene3D MFS general substrate transporter like domains 43 442 IPR036259 -
Vvi4g0662 506 SUPERFAMILY MFS general substrate transporter 47 459 IPR036259 -
Vvi4g0662 506 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 31 477 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0662 Vvi-Chr4 6870931 6884500 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0662 - - vvi:100261254 1018.07