Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0661 ATGGGCAGCCAAACCCCGACAAGCAATGATCGTTCGAGGACATATTGGACACCAACAATGGAACGCTATTTTATTGATCTTATGTTAGACCAGATGCATAGAGGGAGTAGAATTGGCCATACATTCAACAAACAAGCCTGGACAGATATGCTTACCATGTTTAATGCAAAGTTTGGATCACAATATGACAAAGATGTTCTCAAAGGCCGTTATACGAATTTGTGGAAGCAATTCAATGATATAAAGAATCTTCTTGGCCAGAGTGGGTTTTCTTGGGATGAAACTCGGCAAATGGTAGTAGCTGATGATGATGTCTGGGATGCCTATATCAAGTTTCACCCTGACGCACGATCGTACAAGACTAAAGCAGTCCTGAATTTTAATGATCTATACTTGATATATGGGTATACAACTGCTGATGGGAGATATAGTCGTTCAAGTCATGATATGGACATTGATGATGATATCCAAGGAATGAATATGGGTGATGGAATGGGTAGCATAGCCCCATTGAATAATGAGCGCTCAAGGACTGACTGGACAGCAGCCATGGACCAATTTTTTATTGACCTTATGCTGGACCAACTAGGCAAAGGCAATAAGATTGGAAATACATTCAACAAGCAAGCTTGGACAGATATGCTTGCTTTGTTCAATGCAAAGTTTGGTCCTCAACATGGCAAAAGAGTTCTAAGGCATCGGTACAAGAAATTGTGGAAGTATTATAGTGATGTAACAATTCTGCTTAAACAAATTGGTTTTTCCTGGGATGATGAACGAGAAATGATTTTAGCTGATGATGATGTTTGGGATGTTTATATCAAGGCACACCCGCATGCCCGATCATATAGAACAAAAACCCTGCCAAACTATAAGGATCTGGGTTTAATATATGGAGATGCCATCAACAATGGAATGCGTCAAGACAAAGACCTTGAAAATGACCTCTTAGGAGTAAAGGCTGGTGAAGGAAGGGAGAGCCAAACCCCTACTGGAAGTGATCGCTCGAGAACATATTGGACACCGCCAATGGACCGTTATCTCATTGACCTACTACTAGATCAGGTGCATAGAGGGAATAAACTTGGGCAGACATTCATAACCCAGGCTTGGGCAGACATGGTTGCATCATTCAATTCAAAATTTAGATCTCACCATGACAAAGATGTTCTAAAAAATCGGTTCAAACATTTGAGGAGGCAGTACAATGACATAAAGATTCTTCTTCAGCAGAGTGGGTTTTCTTGGGATGAAACACGAGAAATGGTAACAGCTGAAGATCATGTTTGGGATGCTTATACCAAGGCACATCCTGATGCTCGAACATACAGAGTTAAAACTGTACCAAGCTATCACAAATTGTGTGTTATATATGGACAAGAAAGTTCTGATGGAAGATACAGCCGTTTGGCTCGCTATGCAGATCCAATCTGTGAAGTCCCTGTTTTGATGACTGGTGAAGGAAAGGATGTTGAATCTCCTGCTAGTACTGATACTCTGGTGATAGATTGGACGCCACCAATGGACTGTTATTTCATTGACCTTATGGTAGAGCAAGCGAGTGGAGGGAATAAGGTTGATGAGGCATTCAGTGAGCAAGCATGGGCTCACATGGTTACTTCATTTAATGACAAATTTGGCCTTCAGTGTGACAAATATTTTCTAGAAAATCGTTATATGTTCTTTATGAAACAGTATAACGACATCAGCAACCTTCTCAATTATAGTGGGTTTGCATGGAATGAATCTCAACAAATAGTTACTGCTGAGGATCATATCTGGGAAGCTTATATTAAGGGTCACCCAGATGCTGTTTCATTTAGAGACAAATTTTTGGGGAGCTATAGTGATTTATGCAAGATCTTTGGAATTGGAATATTGGATGAAAGTTTCAGTTGTCAGGATCTGTCAATGGAAATCGACCCAAATATTATAGAAGTGAAGATGGATGGGGCTTCTGAAGATTCACAATTTTTTGTGAGGGATTCTGAAATACCTGACCAGAGCAGAAAGCGCCAAACTGCAGTGCCATCAGCCATGGAACATTCCAGAAAAACGCAGAAAACCATGGAGGGGATGCAAGAAGCTCTTAATGAAATGACAGGTATGGTCACGACATTGGTAAGCAACAAAGAGGACAAAAACTCCATCTCCATTGAAAGCGCCATTGATGCACTTCAAGCCATACCAGACATAGATGATGATCTATTGTTGGATGCTTGTGATCTTTTGGAAGATGATAAAAAGGCCAAGACATTTTTAGCGTTGGATGTTGCATTACGAAAGAAGTGGTTGCTGAGAAAGCTTCGTCCATAG 2316 0.4067 MGSQTPTSNDRSRTYWTPTMERYFIDLMLDQMHRGSRIGHTFNKQAWTDMLTMFNAKFGSQYDKDVLKGRYTNLWKQFNDIKNLLGQSGFSWDETRQMVVADDDVWDAYIKFHPDARSYKTKAVLNFNDLYLIYGYTTADGRYSRSSHDMDIDDDIQGMNMGDGMGSIAPLNNERSRTDWTAAMDQFFIDLMLDQLGKGNKIGNTFNKQAWTDMLALFNAKFGPQHGKRVLRHRYKKLWKYYSDVTILLKQIGFSWDDEREMILADDDVWDVYIKAHPHARSYRTKTLPNYKDLGLIYGDAINNGMRQDKDLENDLLGVKAGEGRESQTPTGSDRSRTYWTPPMDRYLIDLLLDQVHRGNKLGQTFITQAWADMVASFNSKFRSHHDKDVLKNRFKHLRRQYNDIKILLQQSGFSWDETREMVTAEDHVWDAYTKAHPDARTYRVKTVPSYHKLCVIYGQESSDGRYSRLARYADPICEVPVLMTGEGKDVESPASTDTLVIDWTPPMDCYFIDLMVEQASGGNKVDEAFSEQAWAHMVTSFNDKFGLQCDKYFLENRYMFFMKQYNDISNLLNYSGFAWNESQQIVTAEDHIWEAYIKGHPDAVSFRDKFLGSYSDLCKIFGIGILDESFSCQDLSMEIDPNIIEVKMDGASEDSQFFVRDSEIPDQSRKRQTAVPSAMEHSRKTQKTMEGMQEALNEMTGMVTTLVSNKEDKNSISIESAIDALQAIPDIDDDLLLDACDLLEDDKKAKTFLALDVALRKKWLLRKLRP* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0661 771 Pfam Myb/SANT-like DNA-binding domain 180 273 IPR024752 -
Vvi4g0661 771 Pfam Myb/SANT-like DNA-binding domain 15 109 IPR024752 -
Vvi4g0661 771 Pfam Myb/SANT-like DNA-binding domain 504 597 IPR024752 -
Vvi4g0661 771 Pfam Myb/SANT-like DNA-binding domain 339 433 IPR024752 -
Vvi4g0661 771 PANTHER EXPRESSED PROTEIN 3 159 - -
Vvi4g0661 771 MobiDBLite consensus disorder prediction 667 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0661 Vvi-Chr4 6845035 6856294 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0661 - - vvi:100266462 1521.14