Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0658 ATGGAAGAAGAAAACCCTTCAGAAACCCTACACCTCATTGGCAAGCCTCCACCAAATCAACCCAAAAAACAACCACCATCACCACCCCCTCCTCCGCACCCACCGCCGACCCTATACCCCACCAAAACCACACCTTTTACCCTCCTCATCCAACCATTCCAATGGCTCCAAATGCTCTGCAAGCAACTCAACCCCACCTTCATCCTCGGCATCGCCCTCGTCTACGGCCTCAGCCAAGGCTTCTCCAACTCCTTCTTCAAGGTCGTCACCGACTTCTACTGGAAAGATGTTCAAAAGGTCCAGCCATCGGTAGTCCAGCTCTACATCGGCTTCTACTACATTCCTTGGATCATGAAACCCGTTTGGGGTCTCCTGACCGACGTCTTCCCCGTCATGGGCTACCGGCGGAGGCCCTACTTTGTGGCCGCCGGCGTTATTGGGACGGTCTCGGCTGCGGTTGTGGCGATTAGCGGGAACCTGCCGGTGGCCGTGGCGTTGGGTTGCCTGATTGGGATAACGGCCGGAGTGGCCATCGCCGATGTGACGATTGATGCGTGCATTGCCCGGAATAGTATAGAGATCAGGTCGCTGGCCGCGGACATGCAGAGCTTCTCCGGGTTCTGCTCGTCAGCCGGCGCTCTCCTCGGCTACTCCAGCAGTGGGTTCTTTGTTCATCATCTTGGGGCTCAGGGAGCGTTAGGCATATTGGTGGGCCCGCCAGCAATGTTGGTGGTGTTAGGGTTTGTGATCTATGAATCGAGAGCCCCCAATCTCGCCTCTAACAACAAGAGGAAGGCAATGGAGAAGGTGGACATAGCAATAAGGGACATGTACAGGACTATAAGGTGCCCTCAAGTGTGGAAGCCTTCACTATACATGTACCTCTCTTTAGCCCTCAGTATAAGCACCCATGAAGGGCAGTTCTATTGGTACACTGACCCTAAAGCTGGCCCTGCATTCTCTCAGGAGTTTGTTGGAATGATCTATGCAGTTGGTGCACTGGCCTCCATCTTAGGAATCCTAATATACCATAAGACTTTAAAGGACTGTCCCTTCAGAACCCTTCTCTTTTTCGCCCAACTTATCTATGCCATTTCTGGGATCCTTGACGTCATCTTCATCCTCCGATGGAACCTAGCGCTTGGTGTTCCAGACTACCTCTTTGTTGTCATGGAGGAATGCATTTCCAGGGTTGTGGCTAGGGTTAGATGGATGCCCATGATCATCCTCAGCACCAAGCTTTGCCCCTTAGGCATTGAAGGCACCTTCTTCGCCCTACTAATGTGCATTGACAGCCTCGGCTCGCTCTCATCCAAGTGGGCAGGAGGCATGGTTCTTCACTTACTGCATGTCACAAGGTCTGATTTTACCAACTTATGGTTAGTTGTTCTTATAAGAAATATTTTGAGGCTTGCCACACTGGGTTTGATTTTTCTTGTCCCTAATGTTGGTCAGTCTGATGAGGTGATTTCCTCTGATTTTTTGAATGATACTTCGAGTGTTAGTGAGGAAGATGATGAGTTCCAAACCTGTTTGAATGAGAACATTGAGCTTTAG 1557 0.5093 MEEENPSETLHLIGKPPPNQPKKQPPSPPPPPHPPPTLYPTKTTPFTLLIQPFQWLQMLCKQLNPTFILGIALVYGLSQGFSNSFFKVVTDFYWKDVQKVQPSVVQLYIGFYYIPWIMKPVWGLLTDVFPVMGYRRRPYFVAAGVIGTVSAAVVAISGNLPVAVALGCLIGITAGVAIADVTIDACIARNSIEIRSLAADMQSFSGFCSSAGALLGYSSSGFFVHHLGAQGALGILVGPPAMLVVLGFVIYESRAPNLASNNKRKAMEKVDIAIRDMYRTIRCPQVWKPSLYMYLSLALSISTHEGQFYWYTDPKAGPAFSQEFVGMIYAVGALASILGILIYHKTLKDCPFRTLLFFAQLIYAISGILDVIFILRWNLALGVPDYLFVVMEECISRVVARVRWMPMIILSTKLCPLGIEGTFFALLMCIDSLGSLSSKWAGGMVLHLLHVTRSDFTNLWLVVLIRNILRLATLGLIFLVPNVGQSDEVISSDFLNDTSSVSEEDDEFQTCLNENIEL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0658 518 MobiDBLite consensus disorder prediction 1 38 - -
Vvi4g0658 518 MobiDBLite consensus disorder prediction 18 38 - -
Vvi4g0658 518 SUPERFAMILY MFS general substrate transporter 68 479 IPR036259 -
Vvi4g0658 518 CDD MFS_FBT 73 478 - -
Vvi4g0658 518 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 51 487 IPR039309 -
Vvi4g0658 518 Gene3D MFS general substrate transporter like domains 63 478 IPR036259 -
Vvi4g0658 518 Pfam BT1 family 287 488 IPR039309 -
Vvi4g0658 518 Pfam BT1 family 79 254 IPR039309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0658 Vvi-Chr4 6796477 6801663 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0658 - - vvi:100244119 974.926