Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0657 ATGGCTTCCATGCCTTTCTCTGTCTCCTTCACTGCTCATTCACCTGGATTTGCCCAAACCAAAGCAGCACATCACCATTCATGGCCTTCTTCTCCTTATCCTTCCATGGCTTTCTTGATGCCATCCACCAAATCCTCTTTTGGGGCCTCTAATTCAGCCTTTTTGCGAACTGGGTTCTCGCTTTGCTCTTCAGAAATTCCTGGGGTCTCCTTGAAATCTCGATTTTCAGGCGGCGTTTATGCGAGAGCGGCTACGGAGAAGAGCCTGTATGATTACACTGTCAAGGATATTGAGAAGAAGGATGTTCCTCTTAGCAAATTTAAGGGCAAAGTCCTCTTGATAGTCAATGTGGCTTCAAAATGTGGTTTGACAGCATCAAACTATTCAGAACTCTCGCACATATATGAGAAGTACAAAACTCAAGGCTTTGAGATTCTAGCTTTCCCTTGCAATCAGTTTGGGGGGCAAGAGCCTGGATCAAATCCCGAGATTAAGCAGTTTGCTTGCACAAGGTTCAAAGCTGAATTCCCAATTTTTGATAAGGTTGATGTTAATGGGCCAACCACTGCTCCAGTTTACCAGTTTCTGAAGTCAAACGCTGGCGGATTTTTGGGTGACCTGATCAAGTGGAACTTTGAGAAGTTTTTGGTGGACAAAAATGGTAAGGTTGTCGAGAGATATCAGCCAACAACATCACCTTTCCAGATTGAGAAGGACATTCAGAGGCTTCTTGCAGCATGA 741 0.4453 MASMPFSVSFTAHSPGFAQTKAAHHHSWPSSPYPSMAFLMPSTKSSFGASNSAFLRTGFSLCSSEIPGVSLKSRFSGGVYARAATEKSLYDYTVKDIEKKDVPLSKFKGKVLLIVNVASKCGLTASNYSELSHIYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDKVDVNGPTTAPVYQFLKSNAGGFLGDLIKWNFEKFLVDKNGKVVERYQPTTSPFQIEKDIQRLLAA* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0657 246 ProSitePatterns Glutathione peroxidases signature 2. 146 153 IPR029760 -
Vvi4g0657 246 Gene3D Glutaredoxin 80 245 - -
Vvi4g0657 246 FunFam Glutathione peroxidase 80 246 - -
Vvi4g0657 246 Pfam Glutathione peroxidase 89 197 IPR000889 GO:0004602|GO:0006979
Vvi4g0657 246 CDD GSH_Peroxidase 88 240 IPR000889 GO:0004602|GO:0006979
Vvi4g0657 246 PANTHER GLUTATHIONE PEROXIDASE 83 244 IPR000889 GO:0004602|GO:0006979
Vvi4g0657 246 SUPERFAMILY Thioredoxin-like 88 245 IPR036249 -
Vvi4g0657 246 ProSitePatterns Glutathione peroxidases active site. 109 124 IPR029759 -
Vvi4g0657 246 ProSiteProfiles Glutathione peroxidase profile. 79 246 IPR000889 GO:0004602|GO:0006979
Vvi4g0657 246 PRINTS Glutathione peroxidase family signature 143 159 IPR000889 GO:0004602|GO:0006979
Vvi4g0657 246 PRINTS Glutathione peroxidase family signature 208 217 IPR000889 GO:0004602|GO:0006979
Vvi4g0657 246 PRINTS Glutathione peroxidase family signature 107 124 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0657 Vvi-Chr4 6786300 6792553 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0657 K00432 - vvi:100245697 491.115