Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0645 ATGGCGTCCCAGCGATCTATCGTCTTCCTTGGCACTGCGATTCTTCTCCTTCTGATCCACGCCTCCCACTGCTTCTACCTCCCCGGCGTCAGTCCTCAGGACTTTCAGAAGGGAGATCCATTGAAGGTGAAAGTGAACAAATTAACCTCTACAAAGACTCAACTTCCTTACACGTACTATTCTCTGCCTTATTGCCGCCCAGGAAAAATTGTGGACAATGCAGAGAATCTCGGGGAAGTGCTTCGTGGTGATCGTATTGAAAACTCCCCTTATGTGTTTAAAATGCGGGAACCACAGTTGTGCAATGTTATCTGCCACCTAAAACTCAATGCAAAAACTGCGAAGGATTTTAAAGAGAAGATTGAAGATGAGTATCGGGTCAACATGATTCTGGATAACCTTCCTCTTGTTGTTCCCATAAGGAGGCTTGATCAAGAATCTCCTCCTCTTTATCAGCTTGGATATCATGTTGGGCTTAAAGCACAATATGCTGGAAACAAGGAAGAGAAGTATTTTATCCACAATCATTTGATATTTACCGTCAAGTTTCATAAAGATTTGCAAACTGACTCAGCAAGGATTGTGGGATTTGAGGTCAAACCATTCAGTATTAAACATGAATACGAAGGGGAATGGAATGGCAAGAATCGTTTATTGACCTGTGACCCCCATACAAAACGCACTGTTATTAATTCCAACTCTCCTCAAGAAGTTGAAGTGAACCAGGAAATTTTATTCACATATGATGTTGAGTTCCAGGAAAGTGATGTGAAGTGGGCATCTAGATGGGATACCTATCTTCTCATGAGTGATGACCAGATCCACTGGTTCTCAATTGTTAATTCTTTGATGATTGTTCTCTTCCTCTCGGGCATGGTAGCAATGATCATGTTGCGGACACTATATCGTGACATCTCCAAGTATAATGAACTTGAGACCCAAGAAGAAGCCCAAGAAGAGACCGGATGGAAATTAGTGCACGGCGATGTTTTCAGACCACCAAGCAACTCAGATTTACTCTGTGTGTATGCTGGAACAGGTGTTCAGTTTTTTGGGATGATACTCATCACCATGCTCTTTGCCGTCCTTGGGTTTCTCTCACCTTCCAACCGCGGTGGGCTAATGACAGCCATGCTTTTCCTCTGGGTCTTTATGGGTCTTTTTGCTGGTTACTCCTCTGCTCGATTGTACAAAATGTTCAAGGGAGCAGAATGGAAGAAAATTGCTCTAAGGACTGCATTCATGTTCCCAGCCACCGTCTTTGTCATCTTCTTTGTCTTAAATGCTCTCATCTGGGGCCAGAAATCATCGGGGGCAGTGCCATTTGGGACAATGTTTGCTCTGGTTTTCTTATGGTTCGGGATTTCTGTTCCCCTTGTGTTTGTGGGCAGTTATGTTGGGTTCAAGAAGCCTGCAATTGAGGATCCTGTGAAGACAAACAAAATCCCAAGGCAGATCCCAGAGCAAGCTTGGTACATGAACCCAATGTTCTCTATTCTAATTGGAGGCATACTCCCCTTTGGAGCAGTTTTCATTGAGCTCTTCTTCATCCTTACCTCAATCTGGCTGAATCAGTTCTACTACATCTTCGGATTCCTCTTCATAGTCTTCGTCATCCTCCTCATCACATGTGCTGAAATAACGATTGTGCTTTGCTACTTCCAGTTGTGCAGTGAGGACTACTTGTGGTGGTGGAGGGCATACTTGACGTCAGGCTCGTCAGCACTATATCTCTTCCTCTATGCAACTTTCTATTTCTTCACGAAGCTTGAAATCACAAAGCTGGTTTCTGGGGCATTGTACTTCGGGTACATGCTGATCGTTTCCTATGCATTTTTTGTGCTAACGGGTACAATCGGATTCTATGCATGTTTCTGGTTCACAAGGCTCATCTACTCATCGGTGAAGATTGATTGA 1917 0.4382 MASQRSIVFLGTAILLLLIHASHCFYLPGVSPQDFQKGDPLKVKVNKLTSTKTQLPYTYYSLPYCRPGKIVDNAENLGEVLRGDRIENSPYVFKMREPQLCNVICHLKLNAKTAKDFKEKIEDEYRVNMILDNLPLVVPIRRLDQESPPLYQLGYHVGLKAQYAGNKEEKYFIHNHLIFTVKFHKDLQTDSARIVGFEVKPFSIKHEYEGEWNGKNRLLTCDPHTKRTVINSNSPQEVEVNQEILFTYDVEFQESDVKWASRWDTYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPSNSDLLCVYAGTGVQFFGMILITMLFAVLGFLSPSNRGGLMTAMLFLWVFMGLFAGYSSARLYKMFKGAEWKKIALRTAFMFPATVFVIFFVLNALIWGQKSSGAVPFGTMFALVFLWFGISVPLVFVGSYVGFKKPAIEDPVKTNKIPRQIPEQAWYMNPMFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVILLITCAEITIVLCYFQLCSEDYLWWWRAYLTSGSSALYLFLYATFYFFTKLEITKLVSGALYFGYMLIVSYAFFVLTGTIGFYACFWFTRLIYSSVKID* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0645 638 Pfam Endomembrane protein 70 56 594 IPR004240 GO:0016020
Vvi4g0645 638 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 24 638 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0645 Vvi-Chr4 6637594 6644647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0645 2 638 Miscellaneous Gene Families AT5G10840 82.683 0.0 1098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0645 K17086 - vvi:100259324 1271.91