Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0640 ATGTCGAAATTCGAATACCCAATGCTCCCACGCTCAGATATCATAGCAATCCTTAACGAATCCAAAATCGCAACAGTCTATGAGGACAATCTCATCAATCCCAACCCCGATTTCGTCTCCGACCTCTACACCAGGCTTCTCATTCACCTCGATTCTCTCCAGGAAGATCCTGGGCAAATCGAATTTGCCGCATTGGAGCAGCTTGAGAACCCAGATTGGCACCGTGATTCTGTTCGTGTCATGAATTTGTACAGCAAGATTAAGGAGCTTGTGGCTTCTCTGGAGTGCCCTAAGAAGTTTACCCTCAAAGATCTTATACGCCCCGATAGGGACAGGACCGAGCGGTTTCTCGGCACCATACTGAATTTCTTTCTTCACAAAGATTCAAAAATGAATGACCTAAGACCAATTGTAGAGGAATTGACTCTTCTAGATGAGCAGCGTAACCAGTTCAAAGATAGAATTTCCCAGTTGGATGCAGAGATTGCAGACTGCAGTGAAGCAAGAGAAAGAGAGAGGCCGCTTGTTGAAGAGGTAGAGGTAAAAGTTAAAGAACTGCGTCAGACCATTCCAAGCCTCAACAATCAGCAGATGTCATTGAGGGCATCTTTTCGAAAAATGAAGGAGAAGGTCACAGAAATGGATGAGAAGATTTCTAGCGCTGAGTTTGCCCTTGTACAAAGTGTCCAAGAAAATGCCAATCTACGTTCTAAAATCATCCAATCACCAGATAAACTACAGAGGGCTTTAGAGGAGAAGAAATCAGATCGAATTGAGGTGAAGAATGCTGAAAAATCAGCAATGCAATCTTTTCAGGAGAAGTCTGCTATTCTTGAGGTTTACACAAAGGCTGGCAAGAAAATGTCCAAGCATTTTGCCCAAATGCAGACTATACAAGAACAGGTGAATTCTGCCAAAGCCATTGAAAAAGATCTCAAGGTTATAAAAACTAAGCTGAGTGAAGAGGGAGTCTTGGAAAAGTCTCTTGAGGCCAAACTTGTTGAATGGCAAGGAAAAGTGGAACAGTTGGATGACCTAAGAAAGCAATTAGAAAAAGAACGAGATTTTAAGTGTGAGGAGGCTGCTAAAGAATTGAATAATGTCAAGTTGGCAGTGGAATCGAGTAGGCATGAGTTGGAAGCAAGGCAAAAGAAGGTTGAAGCCCAAGCAGCGGAGGTTGATGGTATAACTTTAAAGATTAATTCAGTAAAAGAATCTGGAGCAGCTAAACAGCAAGAGTTGATCAGCAAGGGTGAAGAGATTATGAAAGAGTTCCACCTATATGCGAACTCTATTGGGGTCTTGCTGCCAAGGATTCAAGTGGAGACAGAAGTTGATCAAGAAATGTGCACATCCAACTAA 1362 0.4258 MSKFEYPMLPRSDIIAILNESKIATVYEDNLINPNPDFVSDLYTRLLIHLDSLQEDPGQIEFAALEQLENPDWHRDSVRVMNLYSKIKELVASLECPKKFTLKDLIRPDRDRTERFLGTILNFFLHKDSKMNDLRPIVEELTLLDEQRNQFKDRISQLDAEIADCSEARERERPLVEEVEVKVKELRQTIPSLNNQQMSLRASFRKMKEKVTEMDEKISSAEFALVQSVQENANLRSKIIQSPDKLQRALEEKKSDRIEVKNAEKSAMQSFQEKSAILEVYTKAGKKMSKHFAQMQTIQEQVNSAKAIEKDLKVIKTKLSEEGVLEKSLEAKLVEWQGKVEQLDDLRKQLEKERDFKCEEAAKELNNVKLAVESSRHELEARQKKVEAQAAEVDGITLKINSVKESGAAKQQELISKGEEIMKEFHLYANSIGVLLPRIQVETEVDQEMCTSN* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0640 453 Coils Coil 326 378 - -
Vvi4g0640 453 Coils Coil 176 196 - -
Vvi4g0640 453 Gene3D Ncd80 complex, Nuf2 subunit 1 163 IPR038275 -
Vvi4g0640 453 Coils Coil 246 266 - -
Vvi4g0640 453 Pfam Nuf2 family 4 141 IPR005549 GO:0000776|GO:0031262
Vvi4g0640 453 PANTHER MEMBRALIN/KINETOCHORE PROTEIN NUF2 1 434 - -
Vvi4g0640 453 Coils Coil 141 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0640 Vvi-Chr4 6555568 6566091 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0640 K11548 - vvi:100268045 845.884