Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0638 ATGGACCTTGAATCAGTGAGAGACTCTTTGATCAGGCAAGAGGATACCATCGTTTTTAGCCTCATTGAGAGGGCCAAATTCCCCATCAATTCTTGGGCCTACTCTCCCCCTCAGAATGGAGTTGATGCATTTTCTGCCTCTTCTTTCCTTCACTCCTTTGTCAGGGAATCCGAGGCTCTTCACGCTAAGGCCGGTAGATATGAGAACCCAGAAGAAAATCCCTTTTTCCCAGATGATTTACCACCTTCAATGGTGCCAACCCATGATTATAAGCAGGTTTTGCATCCTGCAGGCTCTTCCATTAATGTAAACAAGACTATATGGGATATATACTTAAACAAACTGCTTCCATTGTTTGCTGCTGAGGGCGATGATGGCAACTATGGACTAACTGCAGCTTGTGATCTTGCATGTTTGCAGGCCATCTCTAGAAGGATTCACTATGGAAAATTCGTGGCCGAGGTTAAATTCAAGGAATCCCCAGAAGAATATGGGCCTGCAATCCATGATCAGGATAGAGCAGGTCTGATGAAAATGTTGACATTTGAGGCAGTAGAAGAGATGGTGAAGAAAAGGGTGGAGAAGAAAGCTACGGTTTTTGGACAGGAAGTTAACCTTAGTGACAATAGCAAAAGCAAAGAAACCTATAAAGTCGATCCCTCCGTGGTTTCTCGGCTGTATGAAGAATGGGTGATGCCACTCACCAAGCAAGTCCAAGTTGAGTATCTTCTTCGCCGCCTTGACTGA 747 0.4471 MDLESVRDSLIRQEDTIVFSLIERAKFPINSWAYSPPQNGVDAFSASSFLHSFVRESEALHAKAGRYENPEENPFFPDDLPPSMVPTHDYKQVLHPAGSSINVNKTIWDIYLNKLLPLFAAEGDDGNYGLTAACDLACLQAISRRIHYGKFVAEVKFKESPEEYGPAIHDQDRAGLMKMLTFEAVEEMVKKRVEKKATVFGQEVNLSDNSKSKETYKVDPSVVSRLYEEWVMPLTKQVQVEYLLRRLD* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0638 248 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 1 248 IPR037039 GO:0004106|GO:0009073
Vvi4g0638 248 FunFam Chorismate mutase 1 248 - -
Vvi4g0638 248 ProSiteProfiles Chorismate mutase domain profile. 1 248 IPR008238 GO:0004106|GO:0009073
Vvi4g0638 248 SUPERFAMILY Chorismate mutase II 2 248 IPR036263 GO:0046417
Vvi4g0638 248 NCBIfam chorismate mutase 2 248 IPR008238 GO:0004106|GO:0009073
Vvi4g0638 248 PANTHER CHORISMATE MUTASE 2 248 IPR008238 GO:0004106|GO:0009073
Vvi4g0638 248 PIRSF Chor_mut_AroQ_eu 1 248 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0638 Vvi-Chr4 6534906 6537047 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0638 K01850 - vvi:100261098 493.812