Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0631 ATGAGTTGGAAGTATAGGGCTGGTTTGTTCTTGATTGCTGCTGTTGTCGTTATATGGGTCACCTCCGCAGAAGTCACCCAGGGTATATTTATTGACTATAAGCAGCCATTCGCGGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTATCTCCCAATAGCATTCATTAAGGATTGGTTATGTAATTCCCTAAAACGTCGGTCTTCTAAAAGTGGTAAAAATGCAGAAACCTTGAATGAGTCTTCTGCTGGACTTAATTCTCCTCTAAAACACATTGGAGGGCAGAAAACTTTTGAATTGGAACATCTGGGGACTTTACCTAGAAAAGACAGCGAAACTGATTATTCTGCTTATGAAGAGGGAAGGCCATTAGTTTCTAAACGCAGAGATGACACGGACCTGCTGAAACAAGAGAAAGCTCTTACAACCCGGCAAATTGCTATTTATGGATTTTACATTGCCCCTATCTGGTTTATAACCGAGTATTTTTCAAATGCTGCACTTGCACGTACAAGTGTTGCTAGTACAACCGTCCTATCTTCAACTTCAGGACTCTTCACTCTTTTCATTGGTGCACTTTTGGGCCAAGATTCTTTAAACGTAGCAAAAGTAGTTGCTGTCTTTGTTAGCATGGCTGGTGTTGCTATGACAACTATGGGGAAAACTTGGGCCACAGATGAGTCAAAACTAAGTGCTTCTCTAAATGGGAAACGCTCTCTTGTTGGAGATCTTTTTGGCCTTCTCTCAGCCATGTCATATGGACTATTTACTGTGCTTCTTAAAAAGTTTGCTGGTGAGGAAGGAGAAAGGGTTGATGTGCAAAAGTTGTTTGGATATATTGGATTATTTACACTGGTAGCACTGTGGTGGCTTGTGTGGCCTTTGACAGCCTTAGGGATTGAACCCAAGTTTACAATTCCTCACTCAGCTAAAATGGATGAAGTTGTTATTGCCAATGGCTTTGTTGGGAGTGTCCTCTCTGATTACTTTTGGGCATTGTGTGTTGTTTGGACAACTCCACTGGTTGCCACCTTGGGCATGTCTCTCACTATCCCACTTGCTATGGTAGCTGACATGATGATCCATGGTCGGCACTATTCAGCTATTTACATTCTTGGCTCAGCTCAGGTATTTGCAGGATTTGTAATCGCTAATCTATCAGATTGGTTTTCAAAGAAGTTGGGATTGTAG 1191 0.4181 MSWKYRAGLFLIAAVVVIWVTSAEVTQGIFIDYKQPFAVTYLGASLMVVYLPIAFIKDWLCNSLKRRSSKSGKNAETLNESSAGLNSPLKHIGGQKTFELEHLGTLPRKDSETDYSAYEEGRPLVSKRRDDTDLLKQEKALTTRQIAIYGFYIAPIWFITEYFSNAALARTSVASTTVLSSTSGLFTLFIGALLGQDSLNVAKVVAVFVSMAGVAMTTMGKTWATDESKLSASLNGKRSLVGDLFGLLSAMSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMDEVVIANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMMIHGRHYSAIYILGSAQVFAGFVIANLSDWFSKKLGL* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0631 396 Pfam EamA-like transporter family 139 218 IPR000620 GO:0016020
Vvi4g0631 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 221 - -
Vvi4g0631 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 281 389 - -
Vvi4g0631 396 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 2 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0631 Vvi-Chr4 6416674 6424321 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0631 K15289 - vvi:100257594 763.837