Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0629 ATGGACAACGCATCACGCCGATGGAGATCCAAGCCTCTTCAGACTTCCAATCCCTCTCTCATCATGGCCTTCTTCTCCTGCCTCGCTTGGCTCTACGTCGCCGGCAGATTGTGGCAAGATGCAGAGAACAGAAATATACTAGCTAACCTTCTTATGAAGAATTCTGTCCGGAGACCAAAAGTTCTTACAGTTGAAGACAAGCTGATGGTATTAGGATGCAAAGATTTGGAGAAGAGGATTGTGGAAGCTGAGATGGATTTGACATTGGCCAAGAGTCAAGGGTACCTCAAGAGCCAGTTAAAACAAAGTGGGTCTTCCTCCGACAAGAAGCTTCTTGCTGTTATTGGAGTTTATACTGGATTTGGTAGTCATCTGAAGCGAAATGTGTTTAGAGGGTCTTGGATGCCAAGAGGTGAGGAAGCTTTAAAAAAACTTGAGGAAAGAGGAGTGGTCATACGTTTCGTAATTGGTCGGAGTGCTAATCGAGGTGATAGCTTAGATCGCAATATTGATGTGGAAAATCGCTTGACAAAGGATTTCTTGATTCTTGATGGTCATGAAGAGGCCCAAGAAGAGTTGCCTAAGAAAGCAAAGTTGTTCTTCAGTACAGCGCTTCAAAATTGGGATGCAGAATTTTATGTGAAAGTTGATGACAAGATAGACCTTGATCTTGATGGTTTAATTAGTCTTCTTGAAAGCCGCCGTGGTCAAGATAGCGCTTATATTGGATGCATGAAGTCAGGAGATGTGATAACAGAAGCGGGAAGGCCGTGGTATGAACCTGAATGGTGGAAATTCGGGGATGAGAAATCGTACTTCCGCCATGCAGGTGGTTCACTTATTATACTCTCCAAAAATTTGGTCCAGTATGTTAACATAAACAGTGCATCGCTTATGACTTACGCTCATGATGATATATCTGTGGGGTCATGGATGATGGGTATCCAGGCAACCTATATAGATGACAATCGTTTGTGCTGCAGTAGCTCCCGACAAGATAAGGTATGCTCCGCGGCTTGA 1020 0.4392 MDNASRRWRSKPLQTSNPSLIMAFFSCLAWLYVAGRLWQDAENRNILANLLMKNSVRRPKVLTVEDKLMVLGCKDLEKRIVEAEMDLTLAKSQGYLKSQLKQSGSSSDKKLLAVIGVYTGFGSHLKRNVFRGSWMPRGEEALKKLEERGVVIRFVIGRSANRGDSLDRNIDVENRLTKDFLILDGHEEAQEELPKKAKLFFSTALQNWDAEFYVKVDDKIDLDLDGLISLLESRRGQDSAYIGCMKSGDVITEAGRPWYEPEWWKFGDEKSYFRHAGGSLIILSKNLVQYVNINSASLMTYAHDDISVGSWMMGIQATYIDDNRLCCSSSRQDKVCSAA* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0629 339 Coils Coil 73 93 - -
Vvi4g0629 339 Gene3D - 114 326 - -
Vvi4g0629 339 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Vvi4g0629 339 Pfam Galactosyltransferase 126 320 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi4g0629 339 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 86 318 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi4g0629 339 FunFam Hexosyltransferase 129 325 - -
Vvi4g0629 339 Pfam Domain of unknown function (DUF4094) 16 93 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0629 Vvi-Chr4 6390858 6400947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi4g0629 69 339 Glycosyltransferase AT2G25300 79.705 2.64e-161 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0629 K20854 - vvi:100267872 650.588