Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0620 ATGTTCTACTCTTTCTCCAAAATTGGCTGTTTTGAATTTCATTTTTTTTTTCATTCTATCCTGGAGCGTCAATCTGGTATTTTCTTCAATCTGAATTACGTGGAAGAGCTGGTGATGAATGGAGAGTGGGAGGAGGCTGAGATGTATCTTTCCGGATTTACCAAACTGGAGGACAACAAGTTCTCTACCAAGATATTCTTTGAGATCAGGAAGCAAAAGTACCTAGAGACATTAGACAGGAAACATAAATCACTAGGGAAGTATGGAGATACATTATCGGCGAGAGCATCAATTCTAAGGGAAATCAAGAAGGCTATCGGAGCGAATCCTGTCTTCGTGGGCAAAATGGAACTTCCTGCCATTGATACAGCAGCTCTCCGCAGTCTCGCTAATGAAGACGCCTGA 405 0.4198 MFYSFSKIGCFEFHFFFHSILERQSGIFFNLNYVEELVMNGEWEEAEMYLSGFTKLEDNKFSTKIFFEIRKQKYLETLDRKHKSLGKYGDTLSARASILREIKKAIGANPVFVGKMELPAIDTAALRSLANEDA* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0620 134 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 13 83 IPR027728 GO:0006355
Vvi4g0620 134 SMART ctlh 27 85 IPR006595 -
Vvi4g0620 134 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 27 85 IPR006595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0620 Vvi-Chr4 6251294 6252646 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0620 - - vvi:104879032 207.223