Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi4g0610 ATGGGAGTTGAGGAACAGAATGGTGGGGAGGAGATGCCATGGGGGGACAGTACCTCTTTTGTGGAGCTTACCACTGATGCAGATGCTGATCAGAAAACTCTTGTATTAGTTGCAGAGAGAACAAAGAGAAAAGACCCTCTCAGTCACTTCAAACAATACACAGGAGGATGGAATATCAGTAACAAGCATTACTGGGCTTCTGTTGGTTTTACTGCTTTCCCCATGTTTCTCATCGCCGGTATCTGGTACGTGGTATTTGGGGTGTTCTTATTGGTCATCTTCTTCTGCTATTGCTGTTGTCCAAGGCCCCTTCATGGTTATTCTCGAGCCTGTTACGCTGTCACTCTTGTTTTCCTAGTAATCATCACCATTGCAGCAATGCTTGGAGGTGCTGCTTTATATACTAGCCAGTTTGAGTTCAACCGTACCATAGGAAGAACATTAGCATATGTTGTCCACCAGGCAGAAAGCGCAACTGAAACCCTCCGGAATGTATCTAATTATTTTGATGCAGCTAAGCAAATTCGAGTAGAAAATAAGTTACTGCCTCCAGGCGTCCAAAACTCCATCACCCAGCTCCAAAAGCAGATCAATGATACAGCTAACCAGCTTGCCACCAAAACATCAGATAATTTGGACGGCATACGACACGTCGTGAACGCTGTCTTTGTGATCCTTGGATGGATTCTTGTTGCGGGAACATTCATTTTAGCTGGCATATTTCTTCTTTTCCATAATGTGGCTGGAGATACTTGTCTTGCAATGGACGAATGGGTCCAAAACCCCATTGCTCATACAGCTTTGGATGATATACTTCCCTGTGTCGATGCCGAAACCGCTCAAGATTCACTGTCAAAAGCCAAGGACGTCACTTATCAGGTTCTCAGCATCGTCAACCTCGCCGTTGACGTATCAAACGCTGATCCTGGTGCCGGTCCTTTGGTTCCACTCCTCTGCAACCCCTTCTTTGCTTCTGTGGGTCAAGCATGTCCTCCCGACGCAGTCGACTTGAAAGACGCAACACAGGTATGGAAGAAGTACGTATGTGAGGATTCGAAAAATGATGAGTGTGTGTCGAAAGGCCGTCTCTCCCCTTCCTTGTACAGTGCTATGACAATGGCGGTGAATGTGAGCTATGGGTTTTATTATTACAGTCCCTTTCTGGTTGATTTAGCGGACTGTGATTTTGTGAGGCAAAGCTTCGTTACCATATCCAAGGATCATTGTCCAGGTCTGCAGTCACAGAGTAAATGGATGTACATTGGATTGGTAGTGGTTTCTGCTGCAGTGATGATCTCTTCGATATTCTGGATAGCTCATGGGAGAGAGCAGAAACACCGGTATTATACCAAGCTGGGACTGTCCAAGACTTTTTGA 1377 0.4568 MGVEEQNGGEEMPWGDSTSFVELTTDADADQKTLVLVAERTKRKDPLSHFKQYTGGWNISNKHYWASVGFTAFPMFLIAGIWYVVFGVFLLVIFFCYCCCPRPLHGYSRACYAVTLVFLVIITIAAMLGGAALYTSQFEFNRTIGRTLAYVVHQAESATETLRNVSNYFDAAKQIRVENKLLPPGVQNSITQLQKQINDTANQLATKTSDNLDGIRHVVNAVFVILGWILVAGTFILAGIFLLFHNVAGDTCLAMDEWVQNPIAHTALDDILPCVDAETAQDSLSKAKDVTYQVLSIVNLAVDVSNADPGAGPLVPLLCNPFFASVGQACPPDAVDLKDATQVWKKYVCEDSKNDECVSKGRLSPSLYSAMTMAVNVSYGFYYYSPFLVDLADCDFVRQSFVTISKDHCPGLQSQSKWMYIGLVVVSAAVMISSIFWIAHGREQKHRYYTKLGLSKTF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi4g0610 458 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 222 447 IPR040283 -
Vvi4g0610 458 Coils Coil 190 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi4g0610 Vvi-Chr4 6067869 6071553 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi4g0610 - - vvi:100243982 910.598